| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4219 |
|---|
| Symbol | |
|---|
| ID | 8532656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 4655874 |
|---|
| End bp | 4656800 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_003261550 |
|---|
| Protein GI | 261823444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AAGCGGACTA CATTTGGTTC AATGGCGAGA TGGTTCCTTG GGCTGAAGCA
AAAGTACACG TGATGTCGCA TGCCCTGCAC TATGGCACCT CCGTCTTTGA AGGCGTTCGT
TGCTACAATT CACATAAGGG CCCGGTGGTT TTCCGTCACC GTGAGCACAT GCAGCGCCTG
CATGATTCGG CAAAAATTTA CCGTATGCCA GTCGCACAAA GTGTGGACGA GTTGATGGAA
GCCTGTCGTG AAACGCTGCG CAAAAATAAC CTGACCAGCG CCTATATTCG TCCACTGGTG
TTTATTGGTG ATGTGGGGAT GGGCGTTAAC CCGCCAGACG GTTATCAAAC TGATGTGATC
ATCGCGGCTT TCCCGTGGGG TGCGTATCTG GGTGAAGAAG CGCTGGAAGC CGGTATTGAT
GCGATGGTGT CGTCCTGGAA CCGTGTCGCG GCGAATACCA TTCCAACCGC TGCTAAAGCG
GGCGGTAACT ATCTGTCCTC CCTGCTGGTG GGCAGTGAAG CTCGTCGTCA CGGTTATCAG
GAAGGGATCG CGCTGGATGT CCACGGCTAT GTTTCCGAAG GGGCTGGCGA GAACCTATTT
GAAGTGAAGG ACGGCGTTAT CTTCACGCCG CCGTTTACCT CTTCAGCGCT GCCGGGCATT
ACGCGCGACG CCATCATCAA GTTGGCGAAG GACGCAGGAT ATGAAGTGCG TGAGCAGGTG
CTGTCCCGTG AGTCATTGTA TCTGGCGGAT GAAGTGTTTA TGTCCGGCAC GGCGGCGGAA
ATTACGCCGG TACGCAGCGT AGACGGCATT CAGGTCGGCA TTGGCAAACG CGGCCCGGTC
ACCAAAGCCT TACAGGATGC ATTTTTTGGC CTCTTCACGG GTGAAACCGA AGATAAATGG
GGCTGGTTGG ATCCGATAAA TCGTTAA
|
|---|
| Protein sequence | MTKKADYIWF NGEMVPWAEA KVHVMSHALH YGTSVFEGVR CYNSHKGPVV FRHREHMQRL
HDSAKIYRMP VAQSVDELME ACRETLRKNN LTSAYIRPLV FIGDVGMGVN PPDGYQTDVI
IAAFPWGAYL GEEALEAGID AMVSSWNRVA ANTIPTAAKA GGNYLSSLLV GSEARRHGYQ
EGIALDVHGY VSEGAGENLF EVKDGVIFTP PFTSSALPGI TRDAIIKLAK DAGYEVREQV
LSRESLYLAD EVFMSGTAAE ITPVRSVDGI QVGIGKRGPV TKALQDAFFG LFTGETEDKW
GWLDPINR
|
|---|
| |