Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_4201 |
Symbol | |
ID | 8532638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4630525 |
End bp | 4631571 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | lipopolysaccharide biosynthesis protein WzzE |
Protein accession | YP_003261532 |
Protein GI | 261823426 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCAG AGAACTTGTC TACTGGGAAT GCGTTGATTG ATAACGAACT GGATATTCGT GGTTTATTTT GCCACTTGTG GCGTGGGAAA GTGTGGCCGG TAGCGATTGG CCTGCTTTTT GCCATTGTAG CATTAGGTTA CTCCTATCTT GTTAAACAGG AGTGGAGTGC GACAGCGATT ACCGACAAAC CAACAGTCAA TATGCTGGGT GGGTATTACT CGCAGCAGCA ATTCCTGCGT AACCTTGATG CCCGATCTTT TTCCACTCTT CAGCCTGAAC AACCGCCTAT CTCGGCTGAT GCTTATGGTG AACTCATCAT GCAATTAGCG GCTTATGATA CCCGCCGCGA TTTCTGGTTG CAGACCAACT ACTACAAGCA ACGGCTGGAA GGTGATGAAA AGGCTGACGC GGCCTTGCTG GATGAACTGG TCAATAATAT TCAGTTTACG CCGCGTGATG ATGGAAAAAA AACCAACGAT TCCGTTAAGT TAGTGGCGGA AACCTCTGCG GATGCAAATA CGTTACTCCG TCAGTATGTG GCTTTTGCCA GCCAGCGTGC TGCCAGCCAT CTGAATGAAG AGATTAAAGG GGCCTGGGCC GCCAGAACTA TTTTCATGAA GTCGCAGATT AAACGTCAGG AAGCGGTAGC GAAAGCGATT TACGATCGTG AAATTCGCAG CGTCGAACTG GCACTGAAAA TTGCACAACA ACAAGGTATT AGCCGTAGTC AGACGGATAC ACCAGTAGAT GAAATCCCCG CATCGGAAAT GTTCCTGCTT GGCAGGCCGA TGCTCCAAGC CCGACTGGAG ACGTTACAGA CCAGCGGCCC TCACTACGAA CTGGATTACG ATCAAAATCG TGCGATGTTG GCAACGTTGA ACGTTGGACC AACGCTCGAG CCCAATTTCC AGACGTATCG TTATTTGCGA ACGCCGGAAG AGCCGGTGAA GCGTGACAGC CCGCGCCGGG CATTTCTGAT GGTGATGTGG GGTGCGATTG GTGCGCTCAT CGGGGCGGGG ATTGCCTTGG CCCGCCGTCC GCGCTAA
|
Protein sequence | MKSENLSTGN ALIDNELDIR GLFCHLWRGK VWPVAIGLLF AIVALGYSYL VKQEWSATAI TDKPTVNMLG GYYSQQQFLR NLDARSFSTL QPEQPPISAD AYGELIMQLA AYDTRRDFWL QTNYYKQRLE GDEKADAALL DELVNNIQFT PRDDGKKTND SVKLVAETSA DANTLLRQYV AFASQRAASH LNEEIKGAWA ARTIFMKSQI KRQEAVAKAI YDREIRSVEL ALKIAQQQGI SRSQTDTPVD EIPASEMFLL GRPMLQARLE TLQTSGPHYE LDYDQNRAML ATLNVGPTLE PNFQTYRYLR TPEEPVKRDS PRRAFLMVMW GAIGALIGAG IALARRPR
|
| |