Gene Pecwa_4178 details

Gene Information

• Locus tag: Pecwa_4178
• ID: 8532611
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4604888
• End bp: 4605649
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 55%
• Product: protein of unknown function DUF81
• Protein accession: YP_003261509
• Protein GI: 261823403

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACATC TTGTTCCACC CGACATTTCG CCACTCTTTG CTGGTGTACT GATTTTTTGC 
AGTTTTCTGA CATCGGCATT AACGGCCGCG CTAGGACTGG GCGGCGGCGT CACACTACTG 
GCAATAATGG GTCTAGGGAT GCCAGTCAGC AGCCTGCTGC CGGTTCACGG TATCGTCCAG 
CTCGGTTCCA ACCTGAGCCG CAGCCTGATT CAACGTTTGT ATATCGTCTG GCCGTTGGCG 
CTGTGGTTTT TTATCGGCAG CGTCATTGGC ATCGCACTGG GTGCGCCCGT CGCCGTCTGG 
CTCCCAGACA GTGTGGCAAA GATCGCGCTG GCCAGTTTCA TTCTGTGGTC AGTTTTCCGT 
AAACGCACCG CACCAAAACC GGTTAATCGC TTGTTCTTTA TTCTGGGCGG TGCGCTCACC 
AGTCTTGGCA CCATGGTCGT CGGTGCAACA GGCCCCATGG TCGCTGGGTT GATCAGTTCG 
CAAGGGGTAA CTAAAAAGCC GCTTATTGCC ACGCACGCGC TCTGCATGGT GTTACAACAC 
GGTCTAAAGA TACTGGCATT CGGAATGATG GGATTTGCCT ATCACGACTG GCTACCGATG 
CTGGCGGCAA TGATTGTCAG CGGTGTATTG GGCACCTGGT TGGGTACACG CCTGCTGGAT 
AATTTGCCAG AAAAACTCTT CCGCACGACC TTTCGCCTCA CCATGTTGAT CCTCAGTGCG 
CAGCTCATGT GGCAAGGTGT ACAAGGGCTA CTTGCCCGCT AA 

 

Protein sequence

MLHLVPPDIS PLFAGVLIFC SFLTSALTAA LGLGGGVTLL AIMGLGMPVS SLLPVHGIVQ 
LGSNLSRSLI QRLYIVWPLA LWFFIGSVIG IALGAPVAVW LPDSVAKIAL ASFILWSVFR 
KRTAPKPVNR LFFILGGALT SLGTMVVGAT GPMVAGLISS QGVTKKPLIA THALCMVLQH 
GLKILAFGMM GFAYHDWLPM LAAMIVSGVL GTWLGTRLLD NLPEKLFRTT FRLTMLILSA 
QLMWQGVQGL LAR