Gene Pecwa_4136 details

Gene Information

• Locus tag: Pecwa_4136
• ID: 8532569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4556640
• End bp: 4558817
• Gene Length: 2178 bp
• Protein Length: 725 aa
• Translation table: 11
• GC content: 55%
• Product: glycogen branching enzyme
• Protein accession: YP_003261470
• Protein GI: 261823364

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGCGT TTTCTGATGC GATTAATTCA CTTATTTCCG GTCATTATGC CGATCCATTT 
TCGCTGTTAG GTATGCATCA TTCCTCCGAC GGTCTTGAAG TTCGCGCATT GCTGCCGGAT 
GCGCAGGCAG CGTGGGTTGT GGATGCCAGT AACGGGCGAA AAATCATTGA GCTGGAACGT 
GTAGATGAGC GCGGTTTTTT TTGTGGTCTG GTGCCGCGCC GGAAAAATGC TTTTCACTAT 
CAATTGGCTG TGACCTGGCG TGAAGAAAGC TGGGTGATTG AAGATCCTTA CCGATTTGGC 
CCGCTATTGC AGGATATGGA CATTTGGCTG TTGGCCGAAG GTACCCACCT GCGACCTTAC 
GAGCGGTTAG GCGCACATCT GGAAACGTTG GATGGGGTAG AAGGCACGCG CTTTGCCGTT 
TGGGCACCCA ATGCGCAGCG CGTTTCGGTG GTGGGAGAAT TCAACTTTTG GGATGGCCGC 
CGGCACCCGA TGCGGCTACG CAGGGAAAAC GGCATTTGGG AGCTGTTTCT GCCCGATGTA 
AAAGCAGGGC AGCTCTACAA ATATGAAATG ATCGACAGCC ACGGTAGCGT CCGGCTGAAG 
GCCGATCCTT ACGCTTTTGA AGCGCAGATG CGCCCGGATA CCGCATCACT GATTACGCCA 
CTGCCTGAGA AAGTCCCGAC CAACGAGGCC CGTCGTGAGG CGAATGGCCT GCGCTCTCCT 
ATCTCTATTT ATGAAGTCCA CCTCGGTTCC TGGCGGCGGC ATACAGATAA CAATTTCTGG 
CTGAGCTATC AGGAGTTGGC GAACCAACTG ATTGATTATG TGCAGTACAT GGGCTTCACG 
CACGTTGAGT TGATGCCGAT TAACGAACAT CCGTTCGATG GCAGTTGGGG CTATCAGCCG 
CTGGGATTGT ATGCGCCAAC GCGCCGCTTT GGCACTGCGT CGGAATTCAG AGCGTTTGTT 
GATGCGCTCC ATGATGCGGG TATCAACGTC CTGCTGGACT GGGTACCGGG GCATTTCCCC 
GGTGATGAAT ACGGTCTGGC TCAGTTTGAC GGCACCGCGC TGTATGAATA CGCCGATCCG 
CGCGAAGGCT ATCATCAGGA TTGGAACACG CTGATTTACA ACTATGGCCG CCACGAGGTG 
CGTAATTACC TGGCGGGTAA TGCGCTGTTC TGGATGGAGC GCTACGGTAT CGACGGGCTG 
CGGGTGGATG CAGTGGCTTC GATGATTTAC CGCGACTACA GCCGCAGCGA AGGCGAGTGG 
GTGCCGAACC ATTATGGCGG TAAAGAGAAC CTCGAAGCCA TCGCGTTCCT GCGTTACACC 
AACCACATGC TGGGTCATGC CGCGCCTGCG GCCATCACAC TTGCTGAAGA GTCCACCGAT 
TATCCGGGCG TCACGCTGCC GCCGGACTGC AACGGCTTAG GGTTTCACTA CAAGTGGAAC 
ATGGGCTGGA TGCACGACAC GCTGACCTAT ATGCAGCTCG ATCCGGTTCA CCGTAAACAC 
CATCACGATT TGCTGACATT CGGCATGTTG TACGCCTATA GCGAGAATTT CGTGCTGCCG 
CTGTCTCACG ACGAAGTCGT GCACGGCAAA CGTTCACTGT TGGATCGTAT GCCCGGTGAT 
GTCTGGCAGA AATTTGCCAA TTTACGCGCC TATTACGGTT TTATGTGGGC CTATCCCGGC 
AAAAAGCTGC TGTTTATGGG CGGTGAATTT GCACAAGGGC GTGAGTGGAA TCACGACGCC 
AGTCTGGATT GGCACCTGCT GGATGAACCA GAAGGGTGGC ACCGTGGCGT GCAGGCGCTG 
GTGCGCGATC TTAACCATTA CTATCGCCAG CAGCCGTCGC TGTATCAACT GGATTTTCAG 
CCACAGGGCT TTGAATGGCT GGTGGTGGAC GATCGGGAAA ACTCGGTTTT TGCCTTTGTC 
CGGCGTGATG AGCAGGGCAA CGAAGTACTG GTGGTCAGCA ACTTTACGCC AGTGCCACGC 
TACGGCTATC GGATTGGCAT TAACCAGCCC GGCGGCTGGC GCGAAGTCAT GAACACCGAT 
TCTGTTCACT ATAACGGTAG CGATCAGGGT AACGTTGGGA CGATTTACAG CGAAGAGTGG 
GGCAGCCATC AGCGCCAGCA CTCTCTTGTT CTGACCATTC CGCCGCTTGC CACACTGTAT 
CTGGTGAAGG AGGCGTAA 

 

Protein sequence

MSAFSDAINS LISGHYADPF SLLGMHHSSD GLEVRALLPD AQAAWVVDAS NGRKIIELER 
VDERGFFCGL VPRRKNAFHY QLAVTWREES WVIEDPYRFG PLLQDMDIWL LAEGTHLRPY 
ERLGAHLETL DGVEGTRFAV WAPNAQRVSV VGEFNFWDGR RHPMRLRREN GIWELFLPDV 
KAGQLYKYEM IDSHGSVRLK ADPYAFEAQM RPDTASLITP LPEKVPTNEA RREANGLRSP 
ISIYEVHLGS WRRHTDNNFW LSYQELANQL IDYVQYMGFT HVELMPINEH PFDGSWGYQP 
LGLYAPTRRF GTASEFRAFV DALHDAGINV LLDWVPGHFP GDEYGLAQFD GTALYEYADP 
REGYHQDWNT LIYNYGRHEV RNYLAGNALF WMERYGIDGL RVDAVASMIY RDYSRSEGEW 
VPNHYGGKEN LEAIAFLRYT NHMLGHAAPA AITLAEESTD YPGVTLPPDC NGLGFHYKWN 
MGWMHDTLTY MQLDPVHRKH HHDLLTFGML YAYSENFVLP LSHDEVVHGK RSLLDRMPGD 
VWQKFANLRA YYGFMWAYPG KKLLFMGGEF AQGREWNHDA SLDWHLLDEP EGWHRGVQAL 
VRDLNHYYRQ QPSLYQLDFQ PQGFEWLVVD DRENSVFAFV RRDEQGNEVL VVSNFTPVPR 
YGYRIGINQP GGWREVMNTD SVHYNGSDQG NVGTIYSEEW GSHQRQHSLV LTIPPLATLY 
LVKEA