Gene Pecwa_4119 details

Gene Information

• Locus tag: Pecwa_4119
• ID: 8532552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4535148
• End bp: 4535723
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 52%
• Product: putative DNA uptake protein
• Protein accession: YP_003261454
• Protein GI: 261823348

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGTA TTACCGATGC TGCTCAGGAG CATTTCCTGA AACTGTTGGC AAAACAGGAA 
GAAGGCACAC AGATTCGCGT ATTTGTTATC AATCCAGGTA CGCCAAACGC CGAATGCGGC 
GTCTCTTATT GCCCGCCGGA TGCCGTAGAA GCCAGCGATA CCGTACTGAA GTTTGAAAAA 
ATTTCCGCAT ACGTGGACGA GCTTAGCGCC CCTTATCTGG AAGACGCTGA CATTGACTTC 
GTGACTGACC AGTTAGGTTC TCAGCTCACG CTGAAAGCGC CAAACGCGAA AATGCGTAAA 
GTGGACGACA GCGCTCCGCT GATGGAACGC GTTGAGTATG TGCTGCAATC GCAGATCAAC 
CCACAGCTAG CTGGCCACGG CGGTCGCGTG ACGCTGATGG AAATTACCGA TGACGGTCTG 
GCGATCCTGC AATTTGGCGG CGGCTGTAAC GGCTGTTCTA TGGTTGACGT CACGCTGAAA 
GAAGGGATTG AGAAAGAGCT GCTGCAAACC TTCCCAGAGC TGAAAGGCGT GAGAGATCTC 
ACCGAACACC AGCGTGGCGA GCACTCTTAC TATTAA 

 

Protein sequence

MIRITDAAQE HFLKLLAKQE EGTQIRVFVI NPGTPNAECG VSYCPPDAVE ASDTVLKFEK 
ISAYVDELSA PYLEDADIDF VTDQLGSQLT LKAPNAKMRK VDDSAPLMER VEYVLQSQIN 
PQLAGHGGRV TLMEITDDGL AILQFGGGCN GCSMVDVTLK EGIEKELLQT FPELKGVRDL 
TEHQRGEHSY Y