Gene Pecwa_3986 details

Gene Information

• Locus tag: Pecwa_3986
• Symbol: rplF
• ID: 8532419
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 4402838
• End bp: 4403371
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 51%
• Product: 50S ribosomal protein L6
• Protein accession: YP_003261323
• Protein GI: 261823217

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0087686
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TTGCAAAAGC ACCCGTCGTC ATTCCTGCCG GCGTAGAGGT AAAACTCAAC 
GGTCAGGATG TTTCGATTAA GGGTAAAAAC GGCGAGCTGA GTCGTAAGAT CCATGATGCC 
GTTGAAGTGA AACAAGCTGA CAACGCTCTG ACTTTCGCCC CGCGCGAAGG TTTCGTTGAT 
GGATGGGCCC AAGCGGGTAC CACTCGCGCT CTGTTGAACG CAATGGTTAT CGGTGTTACC 
GAAGGCTTCA CTAAGAAGCT GCAACTGGTT GGTGTTGGTT ACCGTGCTGC TGTTAAAGGC 
AATGTGGTTA ATCTGTCTCT TGGGTTTTCT CACCCAGTTG AGCATGCACT GCCGGCAGGT 
ATTACTGCAG AATGCCCAAG CCAAACTGAA ATCGTACTGA AAGGTGCTGA TAAGCAGGCT 
ATTGGTCAGG TTGCTGCGGA ATTACGCGCC TACCGTCGTC CTGAGCCTTA TAAAGGCAAG 
GGTGTCCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA 

 

Protein sequence

MSRVAKAPVV IPAGVEVKLN GQDVSIKGKN GELSRKIHDA VEVKQADNAL TFAPREGFVD 
GWAQAGTTRA LLNAMVIGVT EGFTKKLQLV GVGYRAAVKG NVVNLSLGFS HPVEHALPAG 
ITAECPSQTE IVLKGADKQA IGQVAAELRA YRRPEPYKGK GVRYADEVVR TKEAKKK