Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3919 |
Symbol | hfq |
ID | 8532345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4326517 |
End bp | 4326816 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | RNA-binding protein Hfq |
Protein accession | YP_003261257 |
Protein GI | 261823151 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0446304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGATCCG TTCTTGAACG CTTTGCGTCG TGAACGTGTT CCGGTTTCGA TTTATTTGGT GAACGGTATT AAGCTGCAAG GTCAGATCGA ATCTTTCGAT CAATTCGTGA TTTTGTTGAA AAACACGGTC AGTCAGATGG TTTATAAACA TGCCATCTCT ACAGTTGTTC CTTCTCGCCC AGTTTCTCAC CATAGCAACA ATCCTGGCGG CAGCAACAAC TATCATGGTA GTAACACGAC TGCTCAGCAA CAGTCGCAGG ATGCTGATGA CGCCGAATAA
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Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS TVVPSRPVSH HSNNPGGSNN YHGSNTTAQQ QSQDADDAE
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