Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3873 |
Symbol | |
ID | 8532299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4278022 |
End bp | 4279749 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_003261213 |
Protein GI | 261823107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.460221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAAA TGACAATGCA ATCGATGTCT GTTCAAAAAG AGAAGTTGAG TTACATCAAC AACATACGCC TCGTCTCGCT ATTTATTACT CTTTTTTCAA TTATCCTGAT TCTTTTTGCG CTTTCTATTG GCACCGCGAG CTATTTCTTA AAGCAGAGTA ATGACTCATT GGATAAAGCG AATGAGCTGT CTGATATTCG GGCTGGTATC AGCAGCAGCC TCGATCAGCT ACGCGTTGCC AGATTGCTAC TCATTCAGGC GGGGGCGGCA AACCGTATTA GCGATCACGA GGTATTTAAA GCTGCTTCAG ACCAGGCTGC TGGTCGAGTC AGAGCCTCAC AGAAACGCCT TGATGAATAT CTCGCGCGTC CAGACAGGCT GGAGAGTGAA AAGGCCCTGG ATGAGGATAT CCTCAAGGCT TATAACAACT ATCGCGATAA TGCGATTGTC GTGATGCAGA AAGCCACGAC TGAGGGTGAA TTTGAAGATC TGGTGTCGTT GGAAAGTACA GTGGCACGCA CATTAGATGA AGCGTTTAGC GTTCCGGTGC GTAAGAAAGT GACTGAACTT ACGAAAGCCG CGCAAGACAT CAACGATCGA GCGGCGGAGA ACGCGAAATT GGGTAACTGG ATGATGGCGG GCTCGTTTGC CTTATCCATC ATTATGGCGA TTATGGCGTA CATCATGGTA CGCAATGTGA TCCTCGCACC TATCAACCGA CTGGTTGAGC GTATCCAGAA GATTGCAGCG GGGGATTTGA CACAACCGCC AATGGTAATG GGACGCAATG AAATCGGCAT TCTGGGAACG AATATCCAGA ATATGCAGGC GGAACTGACT GATACGGTTA CGATCGTGCG TGAGGGGGCA GATTCAATCT ATCAAGGGTC GTCAGAAATT ACGGCGGGTA ACGTCGATCT CTCTTCGCGT ACCGAGCAGC AGGCTGCCGC GCTGGAGGAA ACCGCTGCGA GCATGGAACA GTTGACCGCA ACGGTGAAAC AAAACTCTGA CAACGCTCAC CATGCTAGCC AACTGGCGAA GAACGCGTCT GAAAAAGCAG GGAAAGGCGG GCAGATTGTG CAAGGCGTGG TGGATACCAT GCATGACATT TCCACCAGTT CAAAACGCAT TTCCGAGATC ACTTCCGTTA TTAACAGCAT CGCTTTCCAG ACCAATATTC TGGCGCTGAA CGCCGCAGTA GAAGCTGCTC GGGCGGGTGA ACAAGGGCGT GGTTTTGCCG TGGTTGCGGG TGAAGTTCGC AATCTGGCGC AGCGCAGCGC ACAGGCGGCG AAGGAAATCG AAACGCTGAT TGGCGAATCT GGCAGGCTGG TCGATACCGG CTCTGGGCTG GTGGCGCAGG CGGGGACAAC GATGGGCGAG ATTGTCCGTG CAGTTGTCAG CGTCACTGAC ATTATGGGGG AAATTGCCTC CGCTTCTGAT GAGCAGAGCC GTGGTATCGG GCAAGTGAGC CAGGCCGTGT CCGAAATGGA TAGTGCGACG CAGCAGAATG CGGCGTTGGT ACAGGAAGCC TCGGCAGCGG CGGTTTCACT TGAAGAGCAG GCTGCTCGTT TGACGCAGGC TGTCGCCGTA TTCAAGTTGG CTGGGGTGGC TCAGCAACGG AGAACGTCAT TGCCGAAAGC GGCTCCGCAA CCGCGTTTAG CGCCAGCAAT GGCTCTTGCC AGTTCCAGCG GTAAAGGCAG CGATAATCAA AACTGGGAAA CGTTCTGA
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Protein sequence | MVKMTMQSMS VQKEKLSYIN NIRLVSLFIT LFSIILILFA LSIGTASYFL KQSNDSLDKA NELSDIRAGI SSSLDQLRVA RLLLIQAGAA NRISDHEVFK AASDQAAGRV RASQKRLDEY LARPDRLESE KALDEDILKA YNNYRDNAIV VMQKATTEGE FEDLVSLEST VARTLDEAFS VPVRKKVTEL TKAAQDINDR AAENAKLGNW MMAGSFALSI IMAIMAYIMV RNVILAPINR LVERIQKIAA GDLTQPPMVM GRNEIGILGT NIQNMQAELT DTVTIVREGA DSIYQGSSEI TAGNVDLSSR TEQQAAALEE TAASMEQLTA TVKQNSDNAH HASQLAKNAS EKAGKGGQIV QGVVDTMHDI STSSKRISEI TSVINSIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR NLAQRSAQAA KEIETLIGES GRLVDTGSGL VAQAGTTMGE IVRAVVSVTD IMGEIASASD EQSRGIGQVS QAVSEMDSAT QQNAALVQEA SAAAVSLEEQ AARLTQAVAV FKLAGVAQQR RTSLPKAAPQ PRLAPAMALA SSSGKGSDNQ NWETF
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