| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3605 |
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| Symbol | |
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| ID | 8532031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3972844 |
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| End bp | 3974676 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | diguanylate cyclase with PAS/PAC and GAF sensors |
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| Protein accession | YP_003260948 |
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| Protein GI | 261822842 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.150413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC AGTCAGTTGA TGTTGATTTG ATTACCAGGT TTGACAATGA AGCCAAACTG
CACGCGCTCA ATTCCGTTTA TGCCATTGCC GAGTTTGATC TGGCTGGGAA ACTGGTTGAA
GCCAATCCTC TTTTTTGTAA AATGCTGGGC TATAAAAAAG AAGATATTAT TCAGAAAAAT
CACACATTTT TCCTGCCAGA AGGATTGCGA CAAAAACACG ATCATTTCTG GCACGATGTG
GTTAAAGGAA ATATTAATGC GGGAGAATTC CAACGAAAAA ATCAAAAAGG GGACATTATT
TGGCTACACG CCGCTTATAC GCCCATTATG GATCATTCCG GCCGCCGTAT TGGCGTAATA
AAACTGGCGC TTGATATTAC TCAGGAAAAG CGTCTGATGT CAGAACATCG GGCACAGTTG
GATGCGATTG AAAATGCGCA AGGCGTAATC GAATTTGATA AAGACGGCTA TATCACCCAC
GTCAATAAAC ACTATCTGAT GCTGACAGGT TATGAAGAAA AGGAAATTCT CGGCCTGCAC
CACAAATCAC TCTGTGAACC CCTTTATACC GAACAAGCTG ACTATCAGAC ATTCTGGGAG
ACCTTGCATC GAGGCCACCC CATCAGCGGA CGCTTCCACC GATTGGGTAA GGACAATCAT
TCATTCTGGA TACAGGCAAC CTACAGTCCA ATCATGGATA GTGAAGGCAA TGTGAGAAAA
ATCATTAAAT ATGCTCACAA CATCACGCAA AACGTTGAAA CCGAAAAAAA AGCCCATCAG
CAAGGCATCA TTCTCGATAT CCTGCTGTCA GTCCATGACA GTTTTCTGCT CGACCATAAT
CTGCCTTCAG CCTGCGATAA AGTCTTTGAG CGACTGCTTG ACGTGACCAA CAGCAGTTTC
GGTTTTATCG CCACATTGCA GGAAGATGAA AACGGCCAAT CGCTATACCT GCCTGCGATT
TCCAACCTTG CCTGGGACGA AGACACGCTG GCCTGGTACA GACACCAGCG CAGAACCCAC
GGCGGCCTGA GGCTCCGTAA ACTTGATAAT CTATTTGGCC ATGTTGTGAC CCACAACACC
GTGGTTTGCA CCAATAACCT ATTGAGGCAA AAAGCAGGCC GGGACCTTCC GCCCATCCAT
CCTGCGCTGT ATTCCCTGCT TGGCATTCCT ATCACCCACG ACGGCAAAGC GATCGGAATG
ATCGCACTAG CTAACCGTCG GAACGGTTAC GATCAAACGA TGATCGAACT ACTGGCTCCG
TTGGTGAAAA CGCTCGGTAT CATTATTCAT GCCCGTTCGC TGGAGGATAA GCGCGCACAG
GTAGAAGCCT CTCTCCGCTT TAACGCGGGG CATGATTTTC TGACTGGCCT GCCGAATCGC
AGCACCTTCT TCGAGCAGGC CAGTGCTTTT TTCCAACTCA TACAGCAAAA TCAGCACGCA
GATAAAAGTT GCCTGGCCAT TATTGATATC GATTCCTTCA AAAATATTAA TGACAAATAT
GGCCATCTGG CTGGCGATGC CGTTCTCAAA GAACTGGCGA TGTTGATGCG TATGTCATTA
CGTCAGGAGG ATCTGGTCGC CCGTCTCGGC GGTGAGGAGT TCATCATTCT GTTAAAAGAT
GTCTCCTACC AAACGGCGGT GATGACGATC GAGCGTATTC GTAAAGCGAT TGAGCAACAT
ACGCTGGAAT ACGATCGCCA GAGCCTGCAT TTTACGATCA GCGCAGGGAT TGCTGCCTAC
CGACCTGAGT TTGCCTCCGT TGAGGACTGG ATTCAGCTAG CCGATGAAAA CCTTTATTCC
GCTAAACGGC AAGGGCGTAA CTGTGTGAAA TAA
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| Protein sequence | MNNQSVDVDL ITRFDNEAKL HALNSVYAIA EFDLAGKLVE ANPLFCKMLG YKKEDIIQKN
HTFFLPEGLR QKHDHFWHDV VKGNINAGEF QRKNQKGDII WLHAAYTPIM DHSGRRIGVI
KLALDITQEK RLMSEHRAQL DAIENAQGVI EFDKDGYITH VNKHYLMLTG YEEKEILGLH
HKSLCEPLYT EQADYQTFWE TLHRGHPISG RFHRLGKDNH SFWIQATYSP IMDSEGNVRK
IIKYAHNITQ NVETEKKAHQ QGIILDILLS VHDSFLLDHN LPSACDKVFE RLLDVTNSSF
GFIATLQEDE NGQSLYLPAI SNLAWDEDTL AWYRHQRRTH GGLRLRKLDN LFGHVVTHNT
VVCTNNLLRQ KAGRDLPPIH PALYSLLGIP ITHDGKAIGM IALANRRNGY DQTMIELLAP
LVKTLGIIIH ARSLEDKRAQ VEASLRFNAG HDFLTGLPNR STFFEQASAF FQLIQQNQHA
DKSCLAIIDI DSFKNINDKY GHLAGDAVLK ELAMLMRMSL RQEDLVARLG GEEFIILLKD
VSYQTAVMTI ERIRKAIEQH TLEYDRQSLH FTISAGIAAY RPEFASVEDW IQLADENLYS
AKRQGRNCVK
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