| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3534 |
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| Symbol | |
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| ID | 8531960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3887221 |
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| End bp | 3888570 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | VRR-NUC domain protein |
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| Protein accession | YP_003260877 |
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| Protein GI | 261822771 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACC CCGGCAGCCT TTGTCCCGCC GTCACCTCCA TTACCTGTAC CATGGAGCGG
GGGAAGTTCC CCGCCGATGC GGACCCGTGC TATCTGGCGC AAAAAGCCGA ACTGGCTATG
CGCGTACCGC GACGAATCAC CACCAAAACC GGCCAGGTAC ACTCTTTAAA GCAGTTGGTG
ATGAGCAGCC TGATCCGCAT TGAAGAGTAC AAGGCACACT ATCTGTGGGC CTACAAGGCC
GAAGTGGTCT TTGCCATGGC TGACCCTGTG CCCTTACCCA TGCTGGCCAC CAGTGAAACC
TCTAAAAAGG CCTACGGCGA TAACCTGCCA CACTCCAGCA ATCCCTTTGC CAGGCCGTCG
CCTGAAAACT GGATAAAGCA CAACGTAGAA GGGATGCGCC GCCCGGATAT TATTCTGGTC
AATGACCCGA CCCGCCGCTG GCCCGGACTC GCTGCCACCT ATTTTGATGG CAAGACCTAC
CGCGACAACC TCAAGATGCT GATCGAGGTT AAATTTCCAA GAGACACATT ATCTATTGGA
CAACGTGAAG ATTACGCTTT GATCGCAACG GACAAGCGAT TTGGCGTGAT GCGCATTGAG
GATAACCGTA CTGAAAAACA AAAAGCCTAT GATGAACAAT ACAACGCTGC CACCCGGTCG
AGTGCGGTTC GCTATGCGCT ACCGCCCCCC ATTACCGCTG AACAGAATAC CCTTCAACCC
GTGCCTATCC CAGCGCCTCC ACCCGAAGGC GCACCGGGCA CCCTGCCCCA ACCCCTCTCC
CACAACCTGC CGCTATTAAG CAGCACGCCC TGGACGTACC AGCCCTCAAT GGAGGACTGG
GTGCGGCTCG GCGATGAAGT GTCCAGCCTG ACCGAGCAAG GGTGGGAGTT CGTCCGAGAC
AGCACCCGCG AGGCCTTTCG CCCCTTTGGC GCTTGGGTGA GTGAAAAAGG CAACTGGCTG
TGTCAGGAAG TGATTGACCC CGTTACCCGG CAGGCCCGTT ATACCCTCTC CTGGTTCAGT
GACAAGACCA GCGAAATCAT CACCTGGACG TTTACCCAAC TTCAGGCGTT ATGGAAAACG
GTACAGGCCG GGATGGATAT CACCCTGGAT TACCTCCAAC AAATCGACTG GGTACAGATA
CTGCACGATA TCGGCGACGG CACGGTACAA CTGGCCATTA AAGTCGCCGA GAAGGTCGTG
ACCCATATCA TGACTCTTGC CATCGCCACC GCACTCGTGC TCGCGGTAGC CGCCATCGCC
GCCGCGATTA TCGCTGGCAG TGCTGTCCTG GCCACCCTGC TCGGCGCCCT GACCGCCGTA
GGCGGCGGCA CGCTGGCCAT CGCCAACTAA
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| Protein sequence | MSNPGSLCPA VTSITCTMER GKFPADADPC YLAQKAELAM RVPRRITTKT GQVHSLKQLV
MSSLIRIEEY KAHYLWAYKA EVVFAMADPV PLPMLATSET SKKAYGDNLP HSSNPFARPS
PENWIKHNVE GMRRPDIILV NDPTRRWPGL AATYFDGKTY RDNLKMLIEV KFPRDTLSIG
QREDYALIAT DKRFGVMRIE DNRTEKQKAY DEQYNAATRS SAVRYALPPP ITAEQNTLQP
VPIPAPPPEG APGTLPQPLS HNLPLLSSTP WTYQPSMEDW VRLGDEVSSL TEQGWEFVRD
STREAFRPFG AWVSEKGNWL CQEVIDPVTR QARYTLSWFS DKTSEIITWT FTQLQALWKT
VQAGMDITLD YLQQIDWVQI LHDIGDGTVQ LAIKVAEKVV THIMTLAIAT ALVLAVAAIA
AAIIAGSAVL ATLLGALTAV GGGTLAIAN
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