| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3353 |
|---|
| Symbol | |
|---|
| ID | 8531768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3679180 |
|---|
| End bp | 3680535 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | zinc metallopeptidase RseP |
|---|
| Protein accession | YP_003260698 |
|---|
| Protein GI | 261822592 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0274947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAGTT TTCTCTGGAA TCTTGCCGCG TTTATCATCG CACTCGGTGT GCTGGTCACC
GTCCATGAAT TTGGACATTT CTGGGTGGCA CGCCGTTGTG GTGTGAAGGT AGAGCGCTTC
TCTGTCGGTT TCGGCCGCGC CCTATGGCGC CGTCGCGATC GTACTGGTAC AGAATTCGTG
ATTGCGCTGA TCCCGCTTGG CGGCTACGTG AAGATGCTGG ATGAGCGTGT CGACACGGTA
GCGCCAGAAT TTCGTCACCA ATCCTTTAAC AGCAAAACGG TCTGGCAGCG TGCGGCTATC
GTCAGTGCCG GTCCGATCGC TAATTTCCTG TTTGCCATTG TGGCGTACTG GCTGGTGTTC
ATTCTCGGCG TTCCAGGCGT GCGTCCGGTT GTGGGTGAAA TACTGCCCAA CTCCATCGCG
GCGCAAGCGG AAATGTCGGC AGGAATGGAA CTAAAGTCCG TTGATGGTAT CGAAACGCCT
GATTGGGATA CCGCGCGTCT GGCGATGATC GGTAAAATCG GTGACAGCGA TGTCGTGATC
GGAACCGCAC CTTTAGGCTC TGACCGTGTC GTCCAGAAAA CCCTGGATTT ACGCGAGTGG
CAGTTTGAAC CTGATAAGCA AGATCCGGTT GCTTCGCTCG GGATTATCCC ACGCGGCCCG
CAAATTGAAC CGGTACTGAA TCAGGTGCAG GCTGGCTCGG CAGCGGAAAA AGCAGGTTTG
CAAGTCAGAG ATAGGATCGT TAAAGTCGAC GGGCAGGCTT TAGTACATTG GCGTGATTTT
GTCATCGCCG TGCGTGATAA CCCCGGACAA TCTATTGCGC TGGAGGTGGA ACGAAATGGC
GAAGTAGTGC CGTTAACGTT AACGCCAGAC AGCAAATCTG TGGGAAATGG CAAAGTTGAA
GGGTTGGCCG GCGTTATGCC AAGCGTGACG CCGCTGCCCG AAGAATACAG GACTGTGCGC
CAGTATGGGC CGTTCAGCGC TGTCTATCAG GCAACAGATA AAACCTGGCA ACTGATGAAG
TTGACCGTCA GTATGTTAGG CAAACTGGTT ATGGGTGATG TTAAGCTGAA TAACCTGAGT
GGTCCCATTT CGATTGCTCA GGGTGCAGGA ATGTCAGCAG ATTATGGATT GATTTATTAC
CTGATGTTTT TGGCCTTAAT CAGCGTCAAT TTGGGGATCA TCAATCTGTT TCCTCTGCCG
GTATTGGATG GTGGACACCT GCTCTTTCTT GCGGTTGAAA AGCTGAAGGG TAGGCCGGTT
TCTGAGCGTG TGCAGGACAT TAGCTATCGT ATTGGCACAG TATTGCTGAT GTTGTTAATG
GGACTCGCAC TTTTCAATGA TTTCTCGCGT CTCTAG
|
|---|
| Protein sequence | MLSFLWNLAA FIIALGVLVT VHEFGHFWVA RRCGVKVERF SVGFGRALWR RRDRTGTEFV
IALIPLGGYV KMLDERVDTV APEFRHQSFN SKTVWQRAAI VSAGPIANFL FAIVAYWLVF
ILGVPGVRPV VGEILPNSIA AQAEMSAGME LKSVDGIETP DWDTARLAMI GKIGDSDVVI
GTAPLGSDRV VQKTLDLREW QFEPDKQDPV ASLGIIPRGP QIEPVLNQVQ AGSAAEKAGL
QVRDRIVKVD GQALVHWRDF VIAVRDNPGQ SIALEVERNG EVVPLTLTPD SKSVGNGKVE
GLAGVMPSVT PLPEEYRTVR QYGPFSAVYQ ATDKTWQLMK LTVSMLGKLV MGDVKLNNLS
GPISIAQGAG MSADYGLIYY LMFLALISVN LGIINLFPLP VLDGGHLLFL AVEKLKGRPV
SERVQDISYR IGTVLLMLLM GLALFNDFSR L
|
|---|
| |