Gene Pecwa_3106 details

Gene Information

• Locus tag: Pecwa_3106
• ID: 8531515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 3386426
• End bp: 3387217
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 54%
• Product: endonuclease VIII
• Protein accession: YP_003260455
• Protein GI: 261822349

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGAAG GACCGGAAAT TCGCCGGGCG GCCGATAAGC TGGTTGAGGC AGTGGTGGGG 
AAAACGCTGA CGCGTGTCTG GTTTGCGTTT CCAGAACTGA AGCCGTATGA AACACAATTG 
GTCGGGCAGC AGGTCAGGCA GATCGAAACG CACGGGAAGG CGTTATTGAC CTATTTTAGC 
AACGATCGGG TGTTATATAG CCACAATCAG CTCTATGGCG TGTGGCGAGT TGCGAATGCG 
GGGGAGTCGC CGGAAACGAA ACGAGATTTA CGCATCCGGC TGGAAACACA GGATCGTGCC 
ATTTTGCTCT ATAGCGCATC AGATATTGAA ATGCTGACGC AGGAGACACT GGCGACACAC 
CCTTTTCTGC AACGTATTGG CCCTGATGTG TTGGATCTGT CTCTGACGCC GGAACAGGTC 
TGCGAGCGTT TGTTGCTACC GCGTTTTCGA CGTCGTCAGT TCAGTGGGCT GCTGCTGGAT 
CAGGCTTTTC TCGCAGGGTT GGGGAATTAT CTGCGCGTCG AAATTCTCTG GCAGGCACAA 
CTGGCACCGC AGCATACGGC GTCGCAGTTG AATGAGGAAC AGTTGCAGAC GCTGAGTCGA 
GCGCTGCTGG AGATTCCCCG GTTGTCTTAC AACACGCGCG GCACCGTTGA TGAAAACCAC 
CATCATGGTG CAATTTTCTC GTTCAAGGTT TTCCATCGTG AAGGGGAAAG CTGTGAGCGC 
TGCGGCGGAA TCATTGAAAG AACGATGCTG TCATCGCGCC CATTTTATTG GTGCCCGCAC 
TGCCAGAGGT AG 

 

Protein sequence

MPEGPEIRRA ADKLVEAVVG KTLTRVWFAF PELKPYETQL VGQQVRQIET HGKALLTYFS 
NDRVLYSHNQ LYGVWRVANA GESPETKRDL RIRLETQDRA ILLYSASDIE MLTQETLATH 
PFLQRIGPDV LDLSLTPEQV CERLLLPRFR RRQFSGLLLD QAFLAGLGNY LRVEILWQAQ 
LAPQHTASQL NEEQLQTLSR ALLEIPRLSY NTRGTVDENH HHGAIFSFKV FHREGESCER 
CGGIIERTML SSRPFYWCPH CQR