| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3102 |
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| Symbol | sdhA |
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| ID | 8531511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3381902 |
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| End bp | 3383668 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_003260451 |
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| Protein GI | 261822345 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGC CAGTCAGAGA ATTTGATGCA GTGGTTGTGG GTGCGGGTGG CGCAGGTATG
CGTGCCGCGC TACAAATCTC CCAAATGGGC CAGTCCTGTG CCCTATTATC GAAAGTGTTC
CCAACCCGTT CTCATACTGT ATCTGCGCAG GGCGGTATTA CCGTCGCGTT GGGTAATACC
CATGAGGATA ACTGGGAATG GCATATGTAT GACACCGTCA AAGGGTCGGA TTACATTGGC
GATCAGGACG CGATTGAATA TATGTGTAAA ACCGGCCCGG AAGCGATTCT GGAACTGGAA
CACATGGGGC TACCGTTCTC CCGTCTGGAT GATGGCAGCA TTTATCAGCG TCCGTTCGGT
GGTCAATCCA AGAATTTTGG CGGTGAGCAG GCTGCACGTA CTGCCGCAGC CGCTGACCGT
ACCGGCCATG CGCTGCTGCA CACGCTGTAT CAGCAGAACC TGAAAAATCA CACCACTATT
TTCTCCGAGT GGTATGCCCT CGATCTGGTG AAAAATCAGG ATGGCGCGGT TGTCGGCTGT
ACGGCGATCT GTATCGAAAC CGGTGAAGTT GTCTATTTCA AAGCGAAAGC AACCGTGCTG
GCAACCGGCG GCGCGGGCCG TATCTACCAG TCCACCACCA ATGCGCACAT TAATACCGGC
GACGGCGTGG GCATGGCATT GCGTGCCGGT GTTCCGTTGC AGGACATGGA AATGTGGCAG
TTCCACCCAA CGGGTATTGC TGGTGCGGGT GTGCTGGTCA CCGAAGGCTG TCGTGGTGAA
GGCGGCTATT TGCTGAATAA GCACGGTGAG CGTTTCATGG AACGCTATGC GCCAAACGCG
AAAGATCTGG CCGGTCGTGA TGTGGTTGCT CGTTCTATTA TGATCGAGAT TCGTGAAGGC
CGTGGCTGTG AGGGTCCATG GGGGCCGCAC GCCAAGCTGA AGTTGGATCA TCTGGGTAAA
GACGTTCTGG AATCTCGTCT GCCGGGTATT TTGGAACTGT CCCGCACGTT TGCTCACGTC
GATCCGGTAA AAGAACCGAT TCCGGTTATC CCAACCTGTC ACTACATGAT GGGCGGTATT
CCGACCAAAG TGAGCGGTCA GGCGTTGACG GTAAACGAGA AAGGCGAAGA TGTGGTGATC
CCTGGGCTGT TCGCCGTGGG TGAAATTGCC TGCGTATCGG TTCATGGTGC CAACCGTCTG
GGCGGTAACT CGTTGCTCGA CCTGGTGGTA TTCGGTCGCT CTGCCGGACT TCACCTGAAA
GAATCTCTGG AAGAGCAGGG CGAAAGCCGT GATGCCAGCG AATCCGATAT TGAAGCGTCG
CTCGACCGTA TGAATCGTTG GAACAATACC CGTTCCGGTG AAGATCCGGT TGAAATCCGC
AAGGCGCTGC AATCCTGCAT GCAGAATAAC TTCTCGGTAT TCCGTGAAGG CGATGCGATG
GCGAAAGGGT TGGAAGAGCT GAAAGTGATC CGTGAGCGCC TGAAAGACGC ACGTCTGGAT
GACACCTCAA GCGAGTTCAA CACCCAGCGC ATTGAGTGTC TGGAATTGGA TAACCTGATG
GAAACGGCTT ATGCAACAGC GGTTTCGGCT AACTTCCGTA CCGAAAGTCG TGGGGCGCAT
AGTCGCTTCG ATTACCCAGA GCGTGACGAT GAAAATTGGT TGTGCCATTC GTTGTATCTG
CCGCAAACCG ACAGCATGAC GCGCCGTGAG GTGAACATGC AGCCTAAATT GCGTCCGGCG
TTCCCGCCGA AAATACGTAC TTATTAA
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| Protein sequence | MNLPVREFDA VVVGAGGAGM RAALQISQMG QSCALLSKVF PTRSHTVSAQ GGITVALGNT
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGSIYQRPFG
GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC
TAICIETGEV VYFKAKATVL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPLQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCEGPWGPH AKLKLDHLGK DVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVSGQALT VNEKGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRSAGLHLK
ESLEEQGESR DASESDIEAS LDRMNRWNNT RSGEDPVEIR KALQSCMQNN FSVFREGDAM
AKGLEELKVI RERLKDARLD DTSSEFNTQR IECLELDNLM ETAYATAVSA NFRTESRGAH
SRFDYPERDD ENWLCHSLYL PQTDSMTRRE VNMQPKLRPA FPPKIRTY
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