Gene Pecwa_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_3017 
Symbol 
ID8531423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp3285419 
End bp3285955 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content43% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003260370 
Protein GI261822264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0514274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TTGATACTGC TGTTTACGGC GCAAAAATTA TTCAGCCGAA AGTATTCGGT 
GATGCACGCG GTTTTTTTCT GGAAACTTTT GAAAAGAAAC GCTACCAAAA GATGTTGGAT 
ATCGATTTAG ATTTTGTTCA GGATAACCAT TCCCGTTCGA GTAAAGGTGT CTTACGCGGT 
CTGCATTTCC AGAAAACAAA CCCGCAGGGA AAACTGGTCC GCGTAGTTCG CGGCGAGGTT 
TTTGATGTTG TGGTAGACAT TCGCCAAGAT TCTCCGACCT ACGGAAAATG GTGCGGCGTA 
ACACTGTCAG AAGAAAACAA AACACAATTT TGGCTCCCCC CAGGGCTCGC GCATGGTTTT 
GTCGTCCTCT CAGATATCGT AGATTTCGAG TACAAATGTA CTGATTATTA TGATCCCAGC 
GACGAAGGCT GCCTGTTATG GAACGATCCT AAAGTTGGTA TTAAATGGCC AATATCCGAG 
CCATTGCTAT CTGAGAAAGA CAAATTAGGG AAGTTATTCA AGGATGTGGC AAAATGA
 
Protein sequence
MKIIDTAVYG AKIIQPKVFG DARGFFLETF EKKRYQKMLD IDLDFVQDNH SRSSKGVLRG 
LHFQKTNPQG KLVRVVRGEV FDVVVDIRQD SPTYGKWCGV TLSEENKTQF WLPPGLAHGF 
VVLSDIVDFE YKCTDYYDPS DEGCLLWNDP KVGIKWPISE PLLSEKDKLG KLFKDVAK