| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3010 |
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| Symbol | |
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| ID | 8531416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 3277367 |
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| End bp | 3279502 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | protein of unknown function DUF940 membrane lipoprotein putative |
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| Protein accession | YP_003260363 |
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| Protein GI | 261822257 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0811368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGA ACAGAAACGT TAAACTAGGC TATCTGTCGT TGGCGATCGG CAGCATCTTG
AGTGCGCAGG CGATGGCGGC TGAGACAGAA AACAGCCGTG CCGCGACCAA CCCGAACATG
CGGTTTCAGC CTGCAGGGGT ATCGCAGTCT GATTTTGGTG GCACGGGCCT GTTGCAGATG
CCAACGGCAC GTATGGCGGA AACGGGAGAG TTTAGCCTGA ATTATCGTGA CAATGAGGAG
TATCGGCGCT ATTCGGTGTC GCTCCAACTC TTTGACTGGC TGGAAACGAC GGTGCGTTAT
ACCGATATCC GTACCCGCCC TTATAGCCAC AACCCATCCT TTAGCGGCAG CCAATCCTAT
AAGGATAAAG CATTCGATCT TAAGGCCCGC TTGTGGCAGG AAAGCTACTG GATGCCGGAT
GTTTCCTTAG GATTACGTGA TATTGCAGGG ACTGGACTGT TTGATAGCGA ATATCTGGTA
GCCAGTAAAC GTCTTGGCCC TTTTGATTTC ACCTTGGGTA TGGGGTGGGG CAATATGGCC
GAGAGCGGTA ATATTAAAAA CCCAGCCTGC TCGCTGAGAG CTGGTTTTTG CCAGCGTAGC
GAAAGTACAG AAACCGGTCA GTTTGAAGTA GGGAACTTCT TTCATGGCCC TGCGGCACTG
TTTGGTGGAG TTGAATACCA GACGCCTTGG GATCCGCTGC GTGTAAAGCT TGAGTATGAC
GGTAACGATT ATAGCGCTGA ACGAACGTCA CTTAATGGCC GACCACAGCA ACTTAAGCAT
GATTCCCCCT TCAACATCGG CGCAGTCTAT CGCGTGGGCG ATATACTGGA TACCACGCTG
TCGTGGCAGC GCGGCAATAC CCTGATGTGG GGCTTTACCC TGCGTACCAA CTTTAACAGC
TTGAAGCCAA ATTACTTAGA TGATGCGCCA CCGGTGTATG CACCCGTGCA GGATAGTAAA
GGCACCAACT GGCAGCTCGT TTCGAAAGAG CTGAACGATA AGGCGGGCTT TAAGGACGCT
GATATCTACG TGGACCAAAA GCAGGTCACG ATTGTTGCCG ATCAGACAAA ATATCGCAGC
AGCGAAGAGG CAACACAGCG TGCCGCTACG GTATTGGCGA ACCATGTGCC GGGCAGTATT
GATGAATACC ACCTTGTTCA GCGCAGCCAG CGTCTGCCTA TTGCCAGTAC GGAGGTGGAT
GCCAAAGCCT TCCATCAGGT TAAGCAGGCT GCTACTCCAC TTGGCCAACC GGAACCTGAA
ACGCATCGTA AAGAACCCGT ATCTGACGTG CGTGGTCAGC AGGTGCTGCT TGCGGAACCC
GATCGTCTGA CGTATTCATT AGATCCGACG CTGATGCAGT CTTTTGGTGG CCCAGAATCC
TTCTATATGT ACCAGATTGC GCTGAAAGGT AACGTCGATT ATCGCCTAAG CGATCACTGG
AGCGTGGGTG GGACGGCGAC GCTTAACTTG TTGAATAACT ACGACAAGTT CAACTATAAA
ACCCCACCAG CGGATGGCGC CGCACTGCCA CGCGTCAGAA CTTGGGTGCG TGAATATGCC
ACTTCTTCGG ATCTGTTATT GACCAATCTG CAATTGACCC GCAGGGATAA CCCGGCTCAG
GACTGGTATA CCCAGGTTTA CGGCGGCTAT CTGGAAATGA TGTACGCGGG GGTCGGGTCT
GAGGTGCTGT ATCGTCCATT CGGTAAAAGT TGGGCGCTGG GCATGGATGT AAACTATGTC
AAACAGCGTG ACTGGAACGA CATCATGAGG ATGGCCGATT ACGATGTGGT GACAGGCCAT
CTGACGGCGT ACTGGGAGCT GCCGTTTGTA GAAGGTGCGG TGGCGAAAGT CAGCGTGGGT
CGTTATCTGG CTGGAGATAA AGGGGTGACG ATCGATCTGT CTCGCCGCTT TGACAGCGGG
ATTGTTGCGG GTGCCTTTGC CACCAAAACC AACGTTAGCG CCGCGGAATA CGGTGAAGGC
AGCTTTACTA AAGGCTTCTA CGTCTCTATA CCGTTTGATC TACTGTTCAC TGAACCAACG
GTGAAACGTG GTTCTGTCGG TTGGGTACCG CTGACGCGTG ACGGTGGGCA GCAACTGCAA
CGCCGTAACC CACTGTATGA CGTTACCGAT CACTAA
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| Protein sequence | MTKNRNVKLG YLSLAIGSIL SAQAMAAETE NSRAATNPNM RFQPAGVSQS DFGGTGLLQM
PTARMAETGE FSLNYRDNEE YRRYSVSLQL FDWLETTVRY TDIRTRPYSH NPSFSGSQSY
KDKAFDLKAR LWQESYWMPD VSLGLRDIAG TGLFDSEYLV ASKRLGPFDF TLGMGWGNMA
ESGNIKNPAC SLRAGFCQRS ESTETGQFEV GNFFHGPAAL FGGVEYQTPW DPLRVKLEYD
GNDYSAERTS LNGRPQQLKH DSPFNIGAVY RVGDILDTTL SWQRGNTLMW GFTLRTNFNS
LKPNYLDDAP PVYAPVQDSK GTNWQLVSKE LNDKAGFKDA DIYVDQKQVT IVADQTKYRS
SEEATQRAAT VLANHVPGSI DEYHLVQRSQ RLPIASTEVD AKAFHQVKQA ATPLGQPEPE
THRKEPVSDV RGQQVLLAEP DRLTYSLDPT LMQSFGGPES FYMYQIALKG NVDYRLSDHW
SVGGTATLNL LNNYDKFNYK TPPADGAALP RVRTWVREYA TSSDLLLTNL QLTRRDNPAQ
DWYTQVYGGY LEMMYAGVGS EVLYRPFGKS WALGMDVNYV KQRDWNDIMR MADYDVVTGH
LTAYWELPFV EGAVAKVSVG RYLAGDKGVT IDLSRRFDSG IVAGAFATKT NVSAAEYGEG
SFTKGFYVSI PFDLLFTEPT VKRGSVGWVP LTRDGGQQLQ RRNPLYDVTD H
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