| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2927 |
|---|
| Symbol | |
|---|
| ID | 8531333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3185155 |
|---|
| End bp | 3186567 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | S-methylmethionine transporter |
|---|
| Protein accession | YP_003260284 |
|---|
| Protein GI | 261822178 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAC ACGCATCAGG TTCGGAAGGG CAGTTTAAAC GCACCATGAA AGCTCGCCAT
TTGGTGATGC TTTCGCTCGG TGGTGTCATC GGTACTGGCC TGTTTTTCAA TACGGGTTAC
ATTATTTCCA CGACGGGGGC GGCTGGGACG CTATTGGCGT ATTTGATCGG CGCGTTGGTG
GTGTACCTGG TGATGTTGAG TCTGGGGGAG TTGTCTGTTG CCATGCCGGA AACCGGGGCA
TTCCATGTGT ATGCATCCCG CTATCTCAGC CCGGCAACAG GCTATACCGT GGCGTGGCTA
TATTGGCTGA CGTGGACGGT CGCGCTCGGT TCCAGCCTGA CCGCTGCTGG TTTTTGTATG
CAGTATTGGT TTCCACAGGT GCCAGTCTGG ACCTGGTGCC TGCTGTTTTG TGTGTTGATC
TATTTGCTGA ATGTTGTGTC GTCCCGCTTC TTTGCCGAAG GGGAATTCTG GTTCTCGATT
GTTAAAGTGG TCACGATCCT CGCTTTTATC GTGCTTGGTG GGGGGGCGAT GTTTGGCTTT
ATTCCGATGC AAGATGGTTC TCCCGCCCCG TTCTTCCAGA ACATTACTGC GTCTGGCTGG
TTCCCCTACG GTGGCCTGCC GATCTTGATG ACGATGGTGG CGGTAAATTT CGCCTTCTCC
GGTACGGAAC TGATTGGTAT CGCGGCAGGA GAAACTGAGA ATCCGCACAA GGTTGTACCG
ATGGCGATCC GCACGACCGT CGCGCGGTTG GTGATCTTCT TTTTGGGGAC GGTGCTGGTG
CTGGCGGCGA TAATCCCAAT GGAAGAGGCC GGTATCGCCA AAAGCCCGTT TGTACTGGTG
TTTGAAAAGA TTGGTATTCC TTACGCCGCC GATATTTTTA ATTTCGTGAT TTTGACGGCG
ATCCTGTCCG CTGCTAACTC AGGGCTGTAT GCCTCAGGGC GTATGCTGTG GTCGTTGTCC
AACGAAGGCA CGCTGCCACG CCGTTTTTCT CGTCTGACGC GTCGTGGTAT TCCGCTTTTT
GCCATTTCTG TCAGTATGCT GGGTGGGTTG CTGGCGCTGT TTTCCAGCGT GATTGCGCCG
GACACCGTTT ACGTGGCGCT GTCCGCGATT TCCGGTTTTG CCGTGGTGGC GGTGTGGTTG
AGTATTTGTG CCTCGCACTA TATGTTTCGT CGCCACCATG TCCGTGCCGG AAAACCCCTT
TCCGAACTGC AATATCGTGC ACCTTGGTTC CCGATAACAC CGATTTTGGG ATTCCTGCTG
TGTCTGCTGG CCTGCGTCGG GCTGGCGTTT GACCCAAGCC AGCGGATTGC GCTGTGGTGT
GGAATTCCAT TTGTCGCGCT GTGTTACGGT GCTTATTATT TCACGCAGTC AATGAAGAAG
CGTAGATTAA CGGGAGTGGA AGACATTGCG TAA
|
|---|
| Protein sequence | MEQHASGSEG QFKRTMKARH LVMLSLGGVI GTGLFFNTGY IISTTGAAGT LLAYLIGALV
VYLVMLSLGE LSVAMPETGA FHVYASRYLS PATGYTVAWL YWLTWTVALG SSLTAAGFCM
QYWFPQVPVW TWCLLFCVLI YLLNVVSSRF FAEGEFWFSI VKVVTILAFI VLGGGAMFGF
IPMQDGSPAP FFQNITASGW FPYGGLPILM TMVAVNFAFS GTELIGIAAG ETENPHKVVP
MAIRTTVARL VIFFLGTVLV LAAIIPMEEA GIAKSPFVLV FEKIGIPYAA DIFNFVILTA
ILSAANSGLY ASGRMLWSLS NEGTLPRRFS RLTRRGIPLF AISVSMLGGL LALFSSVIAP
DTVYVALSAI SGFAVVAVWL SICASHYMFR RHHVRAGKPL SELQYRAPWF PITPILGFLL
CLLACVGLAF DPSQRIALWC GIPFVALCYG AYYFTQSMKK RRLTGVEDIA
|
|---|
| |