Gene Pecwa_2550 details

Gene Information

• Locus tag: Pecwa_2550
• ID: 8530951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 2780870
• End bp: 2782834
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 50%
• Product: Protein of unknown function DUF1800
• Protein accession: YP_003259917
• Protein GI: 261821811

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.392949
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAAAC AGGATCGTTT TGCATTAGCG TATCACGCAT CATTTCCCCC CCAGCGGGTC 
TCATCAACCA GTAGAAAATC ACGAGTATTA TCCTTTGTAT TTCACATGTC CTGCTTTCTC 
ATTATGCTGT GGACACTCAC ATTCAGCCCC CCAGGTGTCG CTTTAACGAT CGCAGAAACG 
CGGCATCTGA TAGATCGTAC CGGATTCGGC ACAACCCCGC AGGATATTGA ACGTTTCAAA 
GATATGACGC GGGAGCAAGC CGTGGATTAT CTGCTGGGTA CGCTCAATAC GCCTTTTTAT 
ACTCGTCCCC CTACTTTCGT ACAAAAACCT TATCCCGATT ACTGGCAGAA AGGCTGGCGA 
GAGCAGGAAA TGATTTTTTT CCGTATCAAC GAAATTAACC AGCTACAAGC GTGGTGGGTT 
CAGGAAATGA TCCTTACGCC CACCCCATTT GCCGATCGTC TCACGTTGTT CTGGCATAAC 
CATTTCGTTT CCCGGTTTGA CAATACATTA ATCACCGCGC CTTTTTTCGA TCAACTCACC 
CTGTTTCGTC AGGCGGGTAG CCAGAGTTTT CGCCTTCTGA CGCGGAAAAT ACTGCAAGAT 
CCCATGATGC TTAGCGGGTT GGATAACACG TCCAATACAC GTCAGAATCC TAATGAAAAT 
CTTGCAAGGG AATTGATGGA GCTCTTTACC CTCGGCGAGG GTAACTACAG TGAAAATGAC 
GTCAAACAGG TTGCCCGAAT TCTGGCAGGA CACGGCGTAA ACCCCACCCA ACAATGGCGT 
TATCAATTTG ACGCCAGCGC GGCGGTATCC GGCGAAAAAA CGCTGTTAGG CCAGAAAATT 
CAAGGAACGC CGGATGAAGA GCTCGATCAG CTTGTCGATG TTTTATTGTC GCAACCCCAA 
ACGGCAACAC GTCTGGCGGG AAAATTTTAC CGAGCGTTTA TTTCGTTAGA AGACGACCCT 
GAAACAGTAT CGGCATTAGC GCAAGTGCTA CGCAATCATG ACTATGCGAT GAAACCGTTC 
ATGCGTGCAT TGCTGCTCAG CCCGGCGTTT TGGCACGAAC GCCATCGTGG GGCGTTGGTC 
AAATCCCCAT TGGATCTAAT CGTCGGTTTT TCTCGCACGC TGTCGCTGAT GTTACCCGAT 
CAACACATCT TACTGGATTA CCTTCAGGCA CTGGGGCAAA GCCCGTTTAT GGCCCCTTCT 
GTAGCGGGAT GGGAAGAGGG TACAGCATGG CTTGATGGTA AAACACTGGT CGATCGCACC 
AGAGTGTTAA CCCGACTGTG GACCGCAGTG GAAAACCCGC CTCCCCCTGA TAACAATGGG 
CTAATCGTAC GTTTCTCATC GGAAAGTCGT GGGATCCCGG CACGCTTTAT CGTTACCGCC 
AATGGGCAAC ATCTTGCCAG CATTACTGCA AAACTTGGGG CGGACACCCG GCAAGAGCAA 
GCGTCCAACG AGCCAGGAAA TCTGAAACCG ATGTGGGAAA CCGTCGACAT TCCACTCCCC 
AATGCGTCTG CGGTATTGGA AAATCTCACT ATTACGATGG ATGCTGATGA GCCCGATACC 
CATTTATTTA TCAATTGGAT TTCCTTCAAG GGCTATCGCT TTTCTCCCCA TCAGGCCAGT 
TGGATCATCC CGAAAGGTTC TTCCTGCCTT GCCGACTCAC CGTTAGGATC TTTTTACTGT 
AACTTAAGTT TATCTTTTGA CCTCACCGCC CCAATCAGGA GCGAAACAGC CAGCCTGATA 
GATCGGCACA CCCCGCTCAA CGCCAATATC GAATACGGTA CAGGCCGCCT ACGGCCACAA 
TTGAGTCAAC CGGGAGGCGT GTTACCCGCC GGCATGACGC CTTATTCCCA AATACCTGCT 
CGTTCACTAT TGGCTATCAC GCCTTTCAGG CATTCCGTCG ATCGGGATAA CCATGCCGCA 
ACCTTAAAGG CACTGACTCT TGATCCCGCA TTTAATCTGA AATAG 

 

Protein sequence

MHKQDRFALA YHASFPPQRV SSTSRKSRVL SFVFHMSCFL IMLWTLTFSP PGVALTIAET 
RHLIDRTGFG TTPQDIERFK DMTREQAVDY LLGTLNTPFY TRPPTFVQKP YPDYWQKGWR 
EQEMIFFRIN EINQLQAWWV QEMILTPTPF ADRLTLFWHN HFVSRFDNTL ITAPFFDQLT 
LFRQAGSQSF RLLTRKILQD PMMLSGLDNT SNTRQNPNEN LARELMELFT LGEGNYSEND 
VKQVARILAG HGVNPTQQWR YQFDASAAVS GEKTLLGQKI QGTPDEELDQ LVDVLLSQPQ 
TATRLAGKFY RAFISLEDDP ETVSALAQVL RNHDYAMKPF MRALLLSPAF WHERHRGALV 
KSPLDLIVGF SRTLSLMLPD QHILLDYLQA LGQSPFMAPS VAGWEEGTAW LDGKTLVDRT 
RVLTRLWTAV ENPPPPDNNG LIVRFSSESR GIPARFIVTA NGQHLASITA KLGADTRQEQ 
ASNEPGNLKP MWETVDIPLP NASAVLENLT ITMDADEPDT HLFINWISFK GYRFSPHQAS 
WIIPKGSSCL ADSPLGSFYC NLSLSFDLTA PIRSETASLI DRHTPLNANI EYGTGRLRPQ 
LSQPGGVLPA GMTPYSQIPA RSLLAITPFR HSVDRDNHAA TLKALTLDPA FNLK