| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2504 |
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| Symbol | |
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| ID | 8530905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 2715186 |
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| End bp | 2716862 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | Xylan 1,4-beta-xylosidase |
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| Protein accession | YP_003259872 |
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| Protein GI | 261821766 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAAA ACCCCATTTT TAAAGGATTC AATCCCGATC CGTCTATTTG TCGCTGTAAT
AATGATTATT ACGTTGCTGT TTCTTCTTTT GAATGGTTTC CCGGAATACC AATTTACCAT
TCTACCGACT TAAAAAACTG GACGTTGCAT ACCCATATTT TAAATGATGA AAAGAAAGTT
GATTTAACGC GACTGCCTTC AGCAAAGGGA ATTTGGGCAC CATGCCTCAC CTGGTGTGAA
GAAGAACAGC TTTTTTACGT CATTTACGGC GTTATGAACT CGATGCATGG CCGATATTTC
GATGTAGACA ATTATCTGAT TACGGCACCG GACATTACGG GTCCCTGGAG CGAGCCTGTC
TATTTGCATT CTGGTGGTTA TGATGCCTCC ATTTTGCATG ACGATGACGG GCGGAAATGG
ATTGTCGCTG TCGATTGGGA AACGCGTGAT GGCTACAATG GCGCGATTTC TCTGGTGGAA
TATTCGCCAG AAACGCAAGC CGTCATCGGT TATCCGAAAA GGATCTGGTC GGGTATGACG
GGGATTGGTG CAGAAGGACC GCATCTGACA AAACGAGGCC ATTATTATTA TCTGATGTGT
GCGGAGGGCG GCACGGGCTA CGGGCATTGT GTGACGATGG CGCGAGCGGA ACAGGTCTGG
GGGCCCTATG AAAGCGACGT GGGTAACCCA ATTCTCACGT CGGTGAATCC GGCGCTATTT
GAAAAAAATA ACGCGGAATA TGAGAAGCCC GATTTTTCGA TTTTAGGCGT GAAAGACTAT
CTGCGACCGG AGTGTTTTAA CCCAGAGGTG AAAATACAAA AGGCGGGTCA TGGTAGCTAT
GTCGAAACGC CAGAAGGAGA GGTGTATTTG GTCCATCTCT GCGCGCGGCC TTTTCGTCCA
GAGTTATGCT GCCCCTTAGG GCGCGAATCG GCAATACAGA AAATGCGCTG GACGACAGAG
GGGTGGATGC GGTTGGAAGG GGATGACAAC ATGGCGAAAG CCGTGGTCGA ACCGTGCGCC
TTGCCTGAAT CGCCGTCAGT CGTAACGCCT GCGCGCGACG ACTTTAATGA TGATACGCTC
GCACTGCATT ACTACGCTCC GCGAATTCAT CCTAATTCAT TTACCGACCT GACAAACCGG
GCCAGCTATG TTTGTTTACG CGGGCAGGAA TCGCTCAGTT CCACGAATAA AGTCAGCTTA
CTGGCCAGAA AGTTAACCTC TGTTTATACG ACAGTGAAAA CTAAAATGTG CTTTACCCCA
GAGGTGTTCC AGCATAGTGC AGGACTGGTG TTGTACTACG ACAATATGAA CTACCTCTAT
TTACAAAAGC ACTATGACGA AGAACATCAG TGTGCGGCAC TTTCCGTTAT TCACATGGAA
AATGGCGCGA AGCGGGAAGA CTGGCATGCC AGCGCTCGGC TTAATGCCGA CGCGGTGTAT
TTACGGCTGA CGATTGAAGG GCGGTCGATT TCCTTCGGCT GGTCGTATGA CGATGTACAT
TATCAATCGG TCGGGAATGT TTACGAAACG ATCAAGTTTT CGGATGAATA CAGCCAACAT
GGCGAGTTTA CGGGGACGTT TGTTGGGATC GCCTGTGTAG ACAGCGTGTT GCATCAGCAT
ACTGCTGCGT TTGATTTCTT CGATTATCAG GCGGATGAAA TCCGAGATGT TGAATAA
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| Protein sequence | MIKNPIFKGF NPDPSICRCN NDYYVAVSSF EWFPGIPIYH STDLKNWTLH THILNDEKKV
DLTRLPSAKG IWAPCLTWCE EEQLFYVIYG VMNSMHGRYF DVDNYLITAP DITGPWSEPV
YLHSGGYDAS ILHDDDGRKW IVAVDWETRD GYNGAISLVE YSPETQAVIG YPKRIWSGMT
GIGAEGPHLT KRGHYYYLMC AEGGTGYGHC VTMARAEQVW GPYESDVGNP ILTSVNPALF
EKNNAEYEKP DFSILGVKDY LRPECFNPEV KIQKAGHGSY VETPEGEVYL VHLCARPFRP
ELCCPLGRES AIQKMRWTTE GWMRLEGDDN MAKAVVEPCA LPESPSVVTP ARDDFNDDTL
ALHYYAPRIH PNSFTDLTNR ASYVCLRGQE SLSSTNKVSL LARKLTSVYT TVKTKMCFTP
EVFQHSAGLV LYYDNMNYLY LQKHYDEEHQ CAALSVIHME NGAKREDWHA SARLNADAVY
LRLTIEGRSI SFGWSYDDVH YQSVGNVYET IKFSDEYSQH GEFTGTFVGI ACVDSVLHQH
TAAFDFFDYQ ADEIRDVE
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