| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2491 |
|---|
| Symbol | |
|---|
| ID | 8530892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 2698739 |
|---|
| End bp | 2699722 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_003259859 |
|---|
| Protein GI | 261821753 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAG AGATTGCCCA CACCATCGCA CATTCGGTCG CAATCCCGCA CGTGCGCCCC
TCATTTTTAA CAACACTACT GGCAGGCTCG CTGCTGCTCG GCTCGCTTTC CCTCACGACT
GGCGCACAGG CCGCCATCGA CCTGAAAGCC AATCAGCAGC CAATCCATGC GCCGAAAAAT
GCAGAGGCCA TCACGCAGAT TCCAGCCGGT TTTAAATTTG TTACGCCGGG AAAATTCACT
GTCGCTATTG CCACGTTGGG ATCGTCACCG CCGCTGGCCT TTCTGGCTGA CGACAACAAA
ACCGTGGTAG GCAGCGAGCC AGATATCGCC CGGCTGGTGG CAGACAGCCT TGGGTTGGAG
CTGAACATCG TTCCCACCTC GTGGGAAGAT TGGCCGCTCG GCGTGGCCTC CGGTAAATAT
GACGCCGCCA TTATCAATAT TACGGTCACC AAAGAGCGTA AAGAAAAGTT CGATTTCGCC
ACCTATCGCA TCGACTCACT CGGCTTCTAT GTGAAATCCA CCAGTAAGAT CCAATCCATC
AACGAAGCGA AAGACATTGC CGGCCTCAAG ATTATCGTCG GGTCAGGCAC TAATCAGGAG
GCCGTACTGC TGGCATGGGA TAAACAGAAT CGCGCCAACG GCCTGACTGC CTTTCAGCCG
ATCTATGTCA CGGACGATGC CGCTGCCAAC CTCAGCCTGC AATCCGGCCG TTCTGATGCC
TATTTTGGTC CAAACGTGGT GGGGGCCTAC AAGGCAGAGC TGACCGGCAA AGTTAAGCAT
GTCGGTACGG TAAACGGTGG TTACCCCAAC GTCGCACATA TCGCCGTCAC CACGCGCAAA
GGCAGCGGAT TGGTACAGCC GATTAATACC GCGCTGAACG GCGTGATTAA AAGCGGCGAA
TACGATCGGG TGCTGAACCG TTGGGGAGAG AGTATTGAGC GTATCGACCG TTCAGAAATC
AATCCACCTG GGCTGGGCGA TTAA
|
|---|
| Protein sequence | MQKEIAHTIA HSVAIPHVRP SFLTTLLAGS LLLGSLSLTT GAQAAIDLKA NQQPIHAPKN
AEAITQIPAG FKFVTPGKFT VAIATLGSSP PLAFLADDNK TVVGSEPDIA RLVADSLGLE
LNIVPTSWED WPLGVASGKY DAAIINITVT KERKEKFDFA TYRIDSLGFY VKSTSKIQSI
NEAKDIAGLK IIVGSGTNQE AVLLAWDKQN RANGLTAFQP IYVTDDAAAN LSLQSGRSDA
YFGPNVVGAY KAELTGKVKH VGTVNGGYPN VAHIAVTTRK GSGLVQPINT ALNGVIKSGE
YDRVLNRWGE SIERIDRSEI NPPGLGD
|
|---|
| |