| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2287 |
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| Symbol | oppB |
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| ID | 8530688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2478810 |
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| End bp | 2479730 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | oligopeptide transporter permease |
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| Protein accession | YP_003259664 |
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| Protein GI | 261821558 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0289151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAAAAT TTATTCTTCG CCGCTGCTTA GAGGCGATCC CGACACTATT TATTCTGATC
ACCATCTCAT TCTTCATGAT GCGATTGGCG CCCGGCAGTC CCTTTACCGG GGAGCGTAAT
TTACCGCCGG AAGTGATGGC CAATATTGAG GCCAAATATC ATCTGAACGA TCCCATACTG
ACGCAGTACG GTAACTATTT ACTGCAATTG GTGCAGGGTG ATTTCGGTCC TTCTTTTAAA
TACAAAGACT ATTCCGTAAA CGATCTGGTC GCGACGTCTT TCCCGGTTTC TGCAAAATTA
GGGTTTGCGG CATTCATTCT CGCCATTGTT TTTGGTGTGA GTGCCGGTGT GATCGCTGCG
CTGAATCAGA ATACGAAATG GGACTATACC GTGATGGGTT TTGCCATGAC GGGGGTGGTT
ATTCCCAGCT TTGTCGTTGC ACCACTGCTG GTGCTGATTT TTGCCATTAC GCTACGTTGG
TTACCCGGCG GTGGCTGGAA CGGCGGGGCA CCGAAATACA TTATTTTACC GATGGTGGCG
CTGTCTTTAT CTTATATCGC CAGCATCGCG CGTATCACCC GAGGTTCGAT GATCGAGGTT
TTGCACTCTA ACTTTATCCG CACGGCCCGC GCTAAAGGGC TACCAATGCG TCGTATCGTC
CTGCGCCATG CGTTAAAGCC TGCATTGCTG CCTGTGCTTT CCTATATGGG GCCGGCGTTT
GTCGGGATTA TTACGGGTTC AATGGTGATC GAAACCATCT TTGGCTTGCC GGGTATTGGG
CAACTATTTG TGAATGGTGC GCTGAACCGC GATTACTCAC TGGTACTGAG CCTGACAATT
TTAGTCGGCG GCTTAACCAT TTTATTTAAT GCGATCATTG ACGTGCTCTA CGCTGTTATC
GATCCGAAAA TTCGCTATTA A
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| Protein sequence | MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERN LPPEVMANIE AKYHLNDPIL
TQYGNYLLQL VQGDFGPSFK YKDYSVNDLV ATSFPVSAKL GFAAFILAIV FGVSAGVIAA
LNQNTKWDYT VMGFAMTGVV IPSFVVAPLL VLIFAITLRW LPGGGWNGGA PKYIILPMVA
LSLSYIASIA RITRGSMIEV LHSNFIRTAR AKGLPMRRIV LRHALKPALL PVLSYMGPAF
VGIITGSMVI ETIFGLPGIG QLFVNGALNR DYSLVLSLTI LVGGLTILFN AIIDVLYAVI
DPKIRY
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