| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_2218 |
|---|
| Symbol | |
|---|
| ID | 8530618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 2408312 |
|---|
| End bp | 2409109 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | PTS system, mannose/fructose/sorbose family, IIC subunit |
|---|
| Protein accession | YP_003259595 |
|---|
| Protein GI | 261821489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.116986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCA CCACACTTCA AATTGTGCTG ATATTTCTCG TCGCATGTGT TTCGGGGATG
GGTTCGATTC TCGATGAATT CCAGTTCCAC CGTCCACTCG TCGCTTGTAC GCTAATTGGT
GCAGTATTAG GTGATTTAAA AACCGGGATC ATTATTGGCG GTACGCTGGA AATGATCGCA
TTAGGCTGGA TGAACATCGG TGCGGCAGTG GCACCCGATG CGGCGCTAGC TTCCATTATT
TCAACCATTC TGGTAATTGC CGGTGGTCAG GGAATCGGTG CAGGGATTGC TCTGGCGATC
CCGCTCGCCG CTGCTGGCCA GGTCTTAACC ATTATTGTGC GTACCATCAC GGTGGCATTC
CAGCATGCGG CAGACAGCGC GGCTGAGCGA GGTAACCTGA CGGCCATCAG TTGGATTCAC
GTATCCGCTC TGCTGCTTCA AGCCATGCGT ATCGCCATCC CGGCGGTTAT TGTCGCGGTC
TCTGTCGGTA CTGACGCCGT TCACGCCCTG CTGAACTCCA TCCCGGACGT TGTCACCAAC
GGCTTGAATA TCGCGGGTGG GATGATTGTC GTCGTCGGTT ACGCGATGGT CATCAACATG
ATGCGCGCGG GCTACCTGAT GCCGTTCTTC TATCTTGGCT TCGTTACCGC GGCGTTCACA
GAGTTCAACC TGGTGGCGCT GGGCGTAATC GGTATTGTGA TGGCAGTGCT GTATATCCAG
CTCAGCCCGA AATATAACAA GGTTCAAGGC CAGTCTGTTA CATCAGGCAA TAACGGTCTT
GATAATGAAC TGGATTAA
|
|---|
| Protein sequence | MEITTLQIVL IFLVACVSGM GSILDEFQFH RPLVACTLIG AVLGDLKTGI IIGGTLEMIA
LGWMNIGAAV APDAALASII STILVIAGGQ GIGAGIALAI PLAAAGQVLT IIVRTITVAF
QHAADSAAER GNLTAISWIH VSALLLQAMR IAIPAVIVAV SVGTDAVHAL LNSIPDVVTN
GLNIAGGMIV VVGYAMVINM MRAGYLMPFF YLGFVTAAFT EFNLVALGVI GIVMAVLYIQ
LSPKYNKVQG QSVTSGNNGL DNELD
|
|---|
| |