| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1929 |
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| Symbol | |
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| ID | 8530328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 2091680 |
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| End bp | 2093155 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | lysine transporter |
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| Protein accession | YP_003259316 |
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| Protein GI | 261821210 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.148093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGC ACGATATTCA ACAAACTACA CAGGGCGCAC CGACCCTGCG CCGTGAACTG
AAAGCACGGC ATTTAACGAT GATCGCGATT GGCGGATCGA TTGGCACCGG GCTATTTGTC
GCTTCGGGCG CAACGGTTTC ACAAGCGGGC CCGGGTGGCG CACTCTTGTC CTATGCCCTG
ATTGGGCTGA TGGTTTACTT CCTGATGACT AGTCTGGGCG AACTGGCAGC ATTTATGCCG
GTTTCTGGTT CGTTCTCTAC CTACGGCTCC CGCTATGTTG AAGAAGGTTT CGGCTTTGCG
TTGGGCTGGA ACTATTGGTA CAACTGGGCG GTAACCATCG CGGTCGATCT GGTTGCGGCG
CAGTTGGTGA TGGGGTATTG GTTCCCCGAG GTATCTGGCT GGATCTGGAG CGCCCTGTTT
TTGGCACTGA TGTTCCTGCT TAACTACATT TCTGTGAAAG GGTTTGGCGA AGCCGAGTAC
TGGTTCTCAC TGATTAAAGT GACGACGGTC ATTATTTTCA TCGCCGTTGG CGTAATGATG
ATTACGGGCA TTATGAGCGG TGCGGAAAAT GCAGGGTTCC ACAATTGGCA AATCGGTGAT
GCACCGTTTG CTGGGGGATT CTCTGCCATG ATCGGTGTGG CGATGATTGT TGGCTTCTCT
TTCCAAGGCA CGGAACTGAT TGGTGTCGCC GCGGGTGAAT CTCAGGATCC GGGAAAAAAT
ATACCACGGG CGATCCGCCA GGTTTTCTGG CGCATCCTGT TGTTCTACAT CTTCGCGATT
CTGATTATCA GTTTAATCAT CCCGTATACC GACCCGAACC TGCTGCGTAA TGATGTAAAA
GACATTACGG TAAGTCCGTT CACGCTGGTG TTTGAGAATG CGGGTTTGTT ATCTGCGGCA
GCGGTCATGA ATGCGGTGAT CCTGACGGCG GTGCTGTCGG CGGGTAACTC CGGGATGTAT
GCCTCTACGC GTATGCTGTT TACGTTGGCG TCGGAAGGTA AAGCGCCGCG CATTTTCGCT
AAGCTGTCAA AAGGCGGCGT ACCGCGTAAT GCGTTGTACG CAACAACCGT GGTAGCGGCG
TTGTGTTTCC TGTCTTCTCT GTATGGCAAC CAAACGGTTT ATTTGTGGCT GCTGAATACC
TCCGGTATGA CAGGCTTTAT TGCCTGGCTA GGGATCGCGA TCAGCCATTA CCGTTTCCGC
CGTGGCTATG TGATGCAAGG TCATGACCTG AATCGTTTGC CTTATCAATC GCGTTTCTTC
CCATTGGGGC CGATCTTCGC GTTTGTGCTC TGCCTAATCA TCACGTTGGG ACAGAATTAT
CAGGCGTTCC TGGAAGATAA CATCGACTGG TATGGTGTGA CGGCGACGTA CATCGGTATT
CCGCTGTTCC TGCTGATTTG GCTCGGTTAT AAGCTGTATC GTGGAACAGG CTTCATCAAG
TATCAGGATA TGACGTTCCC GGATCATAAA GACTAA
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| Protein sequence | MAQHDIQQTT QGAPTLRREL KARHLTMIAI GGSIGTGLFV ASGATVSQAG PGGALLSYAL
IGLMVYFLMT SLGELAAFMP VSGSFSTYGS RYVEEGFGFA LGWNYWYNWA VTIAVDLVAA
QLVMGYWFPE VSGWIWSALF LALMFLLNYI SVKGFGEAEY WFSLIKVTTV IIFIAVGVMM
ITGIMSGAEN AGFHNWQIGD APFAGGFSAM IGVAMIVGFS FQGTELIGVA AGESQDPGKN
IPRAIRQVFW RILLFYIFAI LIISLIIPYT DPNLLRNDVK DITVSPFTLV FENAGLLSAA
AVMNAVILTA VLSAGNSGMY ASTRMLFTLA SEGKAPRIFA KLSKGGVPRN ALYATTVVAA
LCFLSSLYGN QTVYLWLLNT SGMTGFIAWL GIAISHYRFR RGYVMQGHDL NRLPYQSRFF
PLGPIFAFVL CLIITLGQNY QAFLEDNIDW YGVTATYIGI PLFLLIWLGY KLYRGTGFIK
YQDMTFPDHK D
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