Gene Pecwa_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1852 
Symbol 
ID8530250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp2014952 
End bp2015530 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content43% 
IMG OID 
Producttranscriptional activator FlhC 
Protein accessionYP_003259240 
Protein GI261821134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00303286 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAGA AAAGTATTGT TCAGGAAGCG AAAGATATCC AGTTGGCGAT GGAGCTCATT 
TCGCTTGGTG CTCGTTTACA GATGTTAGAA AGTGAGACTC AGTTAAGCCG CGGGCGTTTG 
ATCAAACTGT ATAAAGAACT TAGAGGAAGT CCGCCACCAA AGGGAATGTT ACCTTTTTCA 
ACGGATTGGT TTATGACCTG GGAACAGAAT ATTCATTCAT CAATGTTTTA CAACGCGTAC 
AGTTTTTTAA TCAAGAATGG GCAGTGCAGC GGTGTTGAAG CAGTTATTAA ATCTTATCGA 
TTGTACCTGG AACAGTGTGC TCCGCAGAGT GATTCTCCAC TGTTGGCATT GACTCGGGCT 
TGGACATTAG TCCGGTTTGT TGACAGCGGT ATGCTGCAAC TGTCGTCATG TAATTGCTGC 
AAAGGGATGT TTATTACTCA CGCTCATCAA CCTAAAAACA GTTTTGTTTG TAGTTTGTGC 
CAACCACCTT CTAGAGCGGT AAAAAGGCGT AAACTTTCGC AAAACCTTGC CGATATAATA 
CCTCAACTGC TGGATGAACA GGTAAAACAC GCAGTCTGA
 
Protein sequence
MAEKSIVQEA KDIQLAMELI SLGARLQMLE SETQLSRGRL IKLYKELRGS PPPKGMLPFS 
TDWFMTWEQN IHSSMFYNAY SFLIKNGQCS GVEAVIKSYR LYLEQCAPQS DSPLLALTRA 
WTLVRFVDSG MLQLSSCNCC KGMFITHAHQ PKNSFVCSLC QPPSRAVKRR KLSQNLADII 
PQLLDEQVKH AV