Gene Pecwa_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1798 
Symbol 
ID8530196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1952796 
End bp1953818 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content50% 
IMG OID 
ProductMalate/L-lactate dehydrogenase 
Protein accessionYP_003259191 
Protein GI261821085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTT TTAGCCATTA CTATTTACGT GATTATTTAC GCGACCGACT GACAGAAAAT 
GATGTGGACG CATCAATTGC AGAAATTGTG GCGGATAATC TTGTCGAATC CAGCCTGAAA
GGGCATGACT CGCACGGCGT TAGTATGTTG CCGCGTTATA TTGAAGCGAT TCGCGAAGGC
GGGCTTTCAC CTCACGCGCA GGTGGAAAAA ACGCTGGATT TTGGCCCACT GGTCTCGTTT
GACGGTCAGC AGGGTTTTGG GCAAGTGGTG GCAAAGCAGG CACTGGCAGA AGGTATAACA
CGTGCGCAAA CGCATGGTCT GGCGGTGGTG AGTTTAGCCA ATGCTCATCA TCTTGGGCGC
ATTGGCGCGT GGGCAGAACA GGCTGCGGAG GTTGGGTTGG TGTCGCTGCA TTTTGCCAAC
GTGCATACCA AACCCGTGGT ACTGCCATGG CAAGGCCAGC AGGCGCGTTT TGGAACCAAC
CCATTCTGCG CCGGTATTCC AGTCGAACAG GATGGCCCCG TAATTCTGGA TTTTGCTACC
AGCATGATTG CCGGTAACAA GGCTCGTATC GCATGGAATG AGGGTAAATC GGTTGCGCCT
GGCTGTATTG TCGATAACGA AGGTAATCCG ACGGTGGATC CGCGCTGGCT GATGGAACAA
CCGCTGGGTG CACTGTTGCC GTTTGGGGAA CATAAAGGGT CGGGGCTTTC GCTGATTTGT
TCTTTACTTG GCGCGGCATT GACCGGAGGG AAAACGGAAC GCACAGCGAA AGGCGAGGGC
AAACAGATTA TTAACAGTAT GTTGTCTATT TTAATCGATC CGAAAAAATT AGGTGGAGCG
ACAACCTATC AACAGGAAAT ACCTGCGTTA TTAGAATGGG TACGCCAATC CCGTGATGAT
GATGGATTAT TACTACCGGG TGATAAAGAA AAACAAACCT ATCGTCAGCG GTTAACGGAC
GGTATTTTCG TCGATGATAT CAGTTGGGGA CAACTATCTT ATTTAAATAA TAAAGTGGCC
TAA
 
Protein sequence
MPVFSHYYLR DYLRDRLTEN DVDASIAEIV ADNLVESSLK GHDSHGVSML PRYIEAIREG 
GLSPHAQVEK TLDFGPLVSF DGQQGFGQVV AKQALAEGIT RAQTHGLAVV SLANAHHLGR
IGAWAEQAAE VGLVSLHFAN VHTKPVVLPW QGQQARFGTN PFCAGIPVEQ DGPVILDFAT
SMIAGNKARI AWNEGKSVAP GCIVDNEGNP TVDPRWLMEQ PLGALLPFGE HKGSGLSLIC
SLLGAALTGG KTERTAKGEG KQIINSMLSI LIDPKKLGGA TTYQQEIPAL LEWVRQSRDD
DGLLLPGDKE KQTYRQRLTD GIFVDDISWG QLSYLNNKVA