| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1690 |
|---|
| Symbol | |
|---|
| ID | 8530087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1843235 |
|---|
| End bp | 1843615 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, Nlp |
|---|
| Protein accession | YP_003259084 |
|---|
| Protein GI | 261820978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTG AACAACAGGA ACAACGAATG GACTGGCATC CTGCCGATAT CATTGCAGCA
CTGCGTAAAC GAAAGACGAC GTTAGCAGCC GTATCACGTG AGGCGGGTCT TAGTTCATCA
ACGCTTGCAA ATGCACTAAA CCGACCCTGG CCGAAAGGTG AACGACTGAT CGCAGACGCA
CTGGGCATTC CAGCGAGTGA AATCTGGCCG AATCGTTATT TCGATTCACA AGGGCAACGC
ATTCCCGAGA AATTCGTCAT AAAAACAATT AGATCACTTG CTGGGCTTAA TCGCCAACAA
TCAGGGAATA ACATTCTGGT CTCAACTCAG TTCAACCGTA CCGCATCATC AATTGGTTCG
TTAAGACTTA GAACCAATTG A
|
|---|
| Protein sequence | MNIEQQEQRM DWHPADIIAA LRKRKTTLAA VSREAGLSSS TLANALNRPW PKGERLIADA
LGIPASEIWP NRYFDSQGQR IPEKFVIKTI RSLAGLNRQQ SGNNILVSTQ FNRTASSIGS
LRLRTN
|
|---|
| |