Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1645 |
Symbol | |
ID | 8530040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1782499 |
End bp | 1784319 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | UvrD/REP helicase |
Protein accession | YP_003259042 |
Protein GI | 261820936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.417198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCGC GTAGTGTAAG TGCAGCCTAC TTAGCCCAGG CTTCCGAGTT GGCTGGAAAT CCTGGTCAGT TAGCCGCGTA TAACTCCCTG GGGCATTGCG TTGTGCTTGC CGGGCCTGGA AGTGGCAAGA CCAAGACACT TGTACTGAAA CTGGCCCGTA TCTTGGCCGA GGATGTTCAG GCACCACGTG GTGCGGCATG CATCACATAT AGCCAGGAAT GCGCGCGTGA GTTGACCCGT CGTCTTGAAG CGCTGGGGCT CAGAGATGCA CCGAATCTCT TTGTCGGAAC CGTTCATGGG TTCTGTTTGC GTCATCTGTT GATGCCTTAT GGGCGATTGG CCGATCTGCC AATCTCATTT CCGCTGTCGG TGGCTTCTCA GCGTGTGAGT GATCGGTTAC TGCGACAATC TGGTGATCGG CTCTTTGGCT CAGGTCATCC CCATAAGACC ATTGATCTCG GGCGGCATCG CCGTTCAGTG CTGGACCGCA ACAGCACTGC TTGGCGTTCA GAGGAGGAAC TCGCTGCCTG GGCCGAGGCT TACGAATCGG CATTACGGCA GGATGGGCTA ATCGACTACG ACGACATGGT TGTATTCGGC CAGCGTCTGA TCGTCGAGCA TGATTGGGTT TTGCCCTTAG TTCAGGCGAA ATTTCCGGTC CTCGCGGTGG ATGAATATCA GGATTTGGGG GTGGCGCTCC ATCGTATGGT CACGCGTCTG GTTTTTGAGG GGGGCGTGCG CTTGTTCGCT GTGGGTGATT CAGACCAGTC GATATACGGT TTTACTGGGG CCAATGGTGC GTTGCTCATG GAGCTGGCAG GCAGTGAAGG CGTTGAAACA GTTAGGCTCC AATTAAACTA TCGTTCAGGT GCGGGTATCG TCAGTGCTTC TGAGATGGCG CTGGGTGAGG CTCGTGGTTA TCGCGCGAAT GATCCAAACC GTCAGACGAC TATTGAGTTT GTATTGTGTC CTGATGGGAT GGCGGATCAA GCGACTCATG CCATTGCACA GATCATCCCT GCTGCTTTGG CTGCTAAACC AGGACGGACG CTTGGTGATA TTGCCATTCT GTACAGAGAC TATCGTGCCG GAGATATTGT GGCTGATGCG GTGACCGCTG GTGGTTTTGA TTATATCCGT GTGGATAACG CAGCACCTTA TCGCAAGGTT GCCTTGACCA GCTGGGTGGA AGATTGCGCG GCATGGTGCG CCGGCGGCTG GCGTGTTGGT CGTCCGCAAT TGCGTGGGCT AATAGACCGC TACCTCGCGT TTCATCGGAC GAGATTGGAT GATGCGCAAG CTCGACGTGA GGGGCAGAGG CTAACCGCGC TGCTTTGGGC TCTACGCGCC GACCAACAGC CTGCGCGCGA TTTTGTCACG TTGCTGCGCA ATGGTATCGT TGATTCGTTG CTGGGCACTG AGCCGGTGCT TGCAGATCAG GCTGAGCAAT TGAATCGCAT GTCTGCAGCG CTTGCCGAAG GTGGTGCGTT GGCGGCGTTG GATATTGTGA GTTTGGGTGG GCGTGATGGC TCACCTGATC ACCTTAATCT GCTGACGCTC CACTCTGCCA AAGGCTGCGA ATACGACGTG GTCATTATGG TCGGCTTGGA TCTGGGCAAT CTGCCGTGGC GTGGTGAGAC GCCAGAAAAG CTGCGTGAGA GCCGTCGCCT TTTCTATGTG GGGCTAACTC GAGCACGGGA TGAGGTTCAT ATGCTGTATT CCGGTTTTGT TGATGGTCGC TACGGCCCGA TGCGTCAGGG GCGTTCCCCA TTTCTGGATG AGCTGGAGGG GCGGATGCGT GAGGCTGGTT TACGGCAGTA G
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Protein sequence | MPSRSVSAAY LAQASELAGN PGQLAAYNSL GHCVVLAGPG SGKTKTLVLK LARILAEDVQ APRGAACITY SQECARELTR RLEALGLRDA PNLFVGTVHG FCLRHLLMPY GRLADLPISF PLSVASQRVS DRLLRQSGDR LFGSGHPHKT IDLGRHRRSV LDRNSTAWRS EEELAAWAEA YESALRQDGL IDYDDMVVFG QRLIVEHDWV LPLVQAKFPV LAVDEYQDLG VALHRMVTRL VFEGGVRLFA VGDSDQSIYG FTGANGALLM ELAGSEGVET VRLQLNYRSG AGIVSASEMA LGEARGYRAN DPNRQTTIEF VLCPDGMADQ ATHAIAQIIP AALAAKPGRT LGDIAILYRD YRAGDIVADA VTAGGFDYIR VDNAAPYRKV ALTSWVEDCA AWCAGGWRVG RPQLRGLIDR YLAFHRTRLD DAQARREGQR LTALLWALRA DQQPARDFVT LLRNGIVDSL LGTEPVLADQ AEQLNRMSAA LAEGGALAAL DIVSLGGRDG SPDHLNLLTL HSAKGCEYDV VIMVGLDLGN LPWRGETPEK LRESRRLFYV GLTRARDEVH MLYSGFVDGR YGPMRQGRSP FLDELEGRMR EAGLRQ
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