Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1626 |
Symbol | |
ID | 8530021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1765585 |
End bp | 1768434 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003259023 |
Protein GI | 261820917 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCTGGT CGCTTCCCTG GCGCAAGCCC ACTGTGCCGA CCAAAGGCGA ACAGCCGGAC GGCTGGCAGC GCCACATCGA TACACTACAG CAGGCAGGCA TTCCCGAACC CGGTACCAGC GTAAGGGGGA GCCGTCCCGC TACCCAGGCC GATGAGCAGG CCTTGTACGA GGTGGCCCCA TCGTTTGTCG CGTTGCTGCC CTGGGTTGAA TATTTGCCCG AATCACAAAG TATGCTGCTG GAGGATGGTG TCTCAGTCGC CGCCTTCTTT GAACTGACCC CGCTGGGTAC AGAAGGCCGT GAGCCGGTCT GGCTGGCCCA GGCACGGGAT GCGCTGGAAA ACGCGCTGCA GGACAGCTTC GACGAGCTCG ACGACAATCC CTGGGTACTG CAACTCTACG CTCAGGACGA GACCAACTTT GATCAGTATC TGCAGACCCT CAAGGGCTAC ATCCAGCCAC GTGCGCAGCA CTCACGCTTC ACCGAATTCT ATCTGCATTC GATGGCCCAT CACCTGCGCG CAGTAGCAAA GCCGGGAGGC CTGTTCGAGG ATACGACAGT CACGCGTCTG CCCTGGCGAG GGCAAACACG ACGGGTACGC ATGATCGTCT ATCGCCGCAC CGCAGGCAGC ACGACCCGAC GCGGCCAGAC GCCCGAGCAG GCATTGAGTG TGGTCTGTGA TCGCCTGAGC GGTGGTCTGG CCAACGCAGG CATCCGCGCA CAGCGTCTGG ATGCATCGCA CATCCACAAC TGGCTGCTGC GCTGGTTCAA CCCACATCCC ACGCTGCTGG GCCACAGCGC CGAAGACTGC GAACGTTTCT ACCAGTTGAC CGCCTACCCG GACACCCACG ACCTCGACGA AATCGAGCTG GCCTCCGGGT GCGATTTCAG CCAGAGGCTG TTCTTCGGCC AGCCACGTTC AGATACGGCC CGGGGCGAGT GGCACTTTGA CGGCATGCCG CATCGGGTGA TGACGACCGA CCGCCTGCGC GCACCGCCCA GTGTAGGTCA TATGACAGGC GAGAATCGCA AAGGCGACGC CATCAACACC TTGTTCGACC AGATGCCGGA AGACACGATG ATGTGCCTGA CACTGGTTGC CACACCACAG GACGTACTCG AAACACACCT GAATCATCTG GCAAAGAAAG CCGTTGGCGA AACGCTGGCC TCCGAACAAA CCCTGGCGGA TGTGCAAGAG GCGCGCTCAC TGATCGGCAG CGCCCACAAA CTATACCGTG CCAGCCTGGC CTTTTACCTT CGTGGCAAGG ATGAAGAAGA ACTCGACAGC CGGGGACTGC AACTGGCCAA CGTGATGCTG GGCGCAGGCC TGCAGCCGGT ACGCGAAGAG GACGAGGTCG CGCCGCTCAA CACCTACCTG CGCTGGCTGC CGTGTATGTA CAACCCGGCC CAGGACCGCA AACAGTGGTA CACACAAATG ATGTTCGCCC AGCATGTGGC CAACCTCTCA CCGACCTGGG GACGTAGCCG GGGTACAGGT CACCCGGGGA TCACTGTCTT CAATCGCGGT GGAGGCCTGA TCACGTTTGA TCCCTTCAAC CGCCTGGATC GGCAGATGAA CGCGCACCTT TTCCTGTTCG GCCCTACAGG TTCGGGCAAG AGCGCCACCC TCAACAACCT GCTCAATCAG GTCACCGCCA TCTATCGTCC ACGGATCTTC ATTGTGGAGG CTGGCAATTC CTTCGGGCTG TTCTGCGAGT TCGCCCGGCG TTTAGGGCTG ACTGTCAACC GTGTCAAGCT CGCTCCGGGT GCGGGCGTCA GTCTCGCACC GTTCGCCGAT GCCCGCAGAC TCATCGAAAC CCCCAGTGAT GTACAAACAC TCGATGCCGA TGAACTCGAT GACGAGCCAC AGAGCAAGGA AGCCGAGGCC GACGAACAAC GCGATGTGCT GGGCGAACTG GAGATCACGG CACGCCTGAT GATCACGGGG GGTGAAGACA AGGAAGAAGC CCGCATGACC CGCGCCGATC GCTCGTTGAT CCGCCAATGC ATTCTGGACG CCGCTCAGCG CTGCGTCGCT GCGAACCGTA CCGTGCTGAC CCGTGACGTG CGCGATGCAC TACGTGAACG GGGTCATGAC ACGACGCTGC CGGAAATCCG GCGCGCTCGC CTGCTGGAGA TGGCCGACGC GATGGATATG TTCTGCCAGG GCAGCGATGG TGAAATGTTC GACCGTGACG GAACGCCCTG GCCCGAGGCC GACATCACCC TGGTCGACCT GGCAACCTAT GCACGCGAAG GCTACAACGC ACAACTGTCG ATCGCCTACA TCTCGCTTAT CAACACCGTC AACAACATCG CCGAGCGCGA CCAGTTCCTG GGCCGCCCCA TCCTCAACGT GACGGACGAA GGCCATATCA TCACCAAAAA CCCCTTGCTC TCGCCCTACG TCGTGAAGGT CACGAAAATG TGGCGCAAGC TGGGTGCGTG GTTTTGGCTC GCGACACAGA ACATCGACGA CCTGCCGAAG GCCGCAGAAC CCATGCTCAA CATGATCGAA TGGTGGATTT GCCTGTCGAT GCCACCCGAC GAGGTGGAAA AAATCGCAAA GTTCAGGGAA CTGACACCCG CGCAGAAAGC GCTGATGCTG TCCGCACGCA AAGAATCCGG AAAATTCACC GAAGGCGTCA TCCTCTCCAA GAGCCTGGAA GTGCTCTTCC GTGCCGTACC GCCCAGCCTC TATCTCGCCT TGGCGCAGAC CGAACCCGAG GAAAAAGCCG AACGCTACCA ACTGATGCAG CAGCTCGGGA TTGGGGAGTT GGATGCGGCG TTCAAAGTGG CCGAAATGAT TGATCATGCA CGTGGTATCA CGCCCATGGC GCAAAGGTAA
|
Protein sequence | MVWSLPWRKP TVPTKGEQPD GWQRHIDTLQ QAGIPEPGTS VRGSRPATQA DEQALYEVAP SFVALLPWVE YLPESQSMLL EDGVSVAAFF ELTPLGTEGR EPVWLAQARD ALENALQDSF DELDDNPWVL QLYAQDETNF DQYLQTLKGY IQPRAQHSRF TEFYLHSMAH HLRAVAKPGG LFEDTTVTRL PWRGQTRRVR MIVYRRTAGS TTRRGQTPEQ ALSVVCDRLS GGLANAGIRA QRLDASHIHN WLLRWFNPHP TLLGHSAEDC ERFYQLTAYP DTHDLDEIEL ASGCDFSQRL FFGQPRSDTA RGEWHFDGMP HRVMTTDRLR APPSVGHMTG ENRKGDAINT LFDQMPEDTM MCLTLVATPQ DVLETHLNHL AKKAVGETLA SEQTLADVQE ARSLIGSAHK LYRASLAFYL RGKDEEELDS RGLQLANVML GAGLQPVREE DEVAPLNTYL RWLPCMYNPA QDRKQWYTQM MFAQHVANLS PTWGRSRGTG HPGITVFNRG GGLITFDPFN RLDRQMNAHL FLFGPTGSGK SATLNNLLNQ VTAIYRPRIF IVEAGNSFGL FCEFARRLGL TVNRVKLAPG AGVSLAPFAD ARRLIETPSD VQTLDADELD DEPQSKEAEA DEQRDVLGEL EITARLMITG GEDKEEARMT RADRSLIRQC ILDAAQRCVA ANRTVLTRDV RDALRERGHD TTLPEIRRAR LLEMADAMDM FCQGSDGEMF DRDGTPWPEA DITLVDLATY AREGYNAQLS IAYISLINTV NNIAERDQFL GRPILNVTDE GHIITKNPLL SPYVVKVTKM WRKLGAWFWL ATQNIDDLPK AAEPMLNMIE WWICLSMPPD EVEKIAKFRE LTPAQKALML SARKESGKFT EGVILSKSLE VLFRAVPPSL YLALAQTEPE EKAERYQLMQ QLGIGELDAA FKVAEMIDHA RGITPMAQR
|
| |