| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1311 |
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| Symbol | |
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| ID | 8529700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1425215 |
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| End bp | 1428337 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | multidrug efflux system subunit MdtB |
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| Protein accession | YP_003258724 |
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| Protein GI | 261820618 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0917699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGATA CCGTTCCAGC CAGCGGAGGC GGGCCATCAC GCCTGTTTAT TCTGCGCCCC
GTCGCGACGA CGCTGTTGAT GTTCGCCATT TTGTTGGCCG GCATCATTGG CTATCGGGCA
CTGCCCGTTT CAGCGCTGCC CGAGGTTGAT TATCCGACGA TTCAGGTCGT TACCCTGTAT
CCAGGAGCCA GCCCCGACGT AGTGACCTCG GCGATTACCG CGCCGCTGGA ACGGCAGTTC
GGCCAGATGT CCGGGCTAAA ACAGATGTCG ACGCAGAGCG CAGGCGGCGC ATCCGTCATC
ACGCTTCAAT TCCAGCTTGA GCTGTCGCTG GACGTCGCGG AGCAGGATGT GCAGGCGGCC
ATTAATGCGG CCAGCAATCT GTTGCCAAGC GATCTGCCCT ATCCACCCAC TTACAGCAAA
GTGAACCCGG CTGATCCGCC CATTATGACG CTGGCCGTCA CCTCCACCGC AATGTCGATG
ACGCAGGTGC AGGACATGGT GGACAACCGG ATCGCGCAAA AAATTTCGCA GGTCGCAGGC
GTCGGGCTGG TGTCGTTAGC CGGCGGCCAG CGACCGGCCG TGCGGGTAAG GCTAAACGCG
CCGGCGCTGG CGGCTTACGG TCTGACCAGC GAAACTATTC GCACCGCGAT TACCGCCGCC
AACGTGAATT CAGCCAAAGG GAGTCTGGAT GGTCCGACGC GTTCAGTGAC GCTCTCCGCC
AACGATCAGA TGAAATCTGT TGATGATTAC CGCAGGCTGA TTGTTGCGTG GAAAAACGGC
GCACCGGTAA GGCTTCAGGA TGTCGCCACG ATTGAGCAGG CCGCCGAGAA TATTCATCTC
GGTGCCTGGG CGAATCGGCA GCAGGCGATC ATTATCAACG TTCAGCGCCA GCCAGGTGCT
AACGTTATCA CGACGACGGA CAGCATTAAC AAGATGCTGC CCGCGTTAAA AGCCAGCCTG
CCGAATGCCG TCGAGGTCAC CACGCTGACC GACCGCACCA CCAGCATTCG CGCCTCAGTA
AAAGACGTCC AGTTCGAGTT ACTGCTGGCG ATCGCGCTGG TCGTGATGGT GATTTACCTG
TTCTTGCGTA ACGCCGTCGC CACGCTGATC CCAAGCATTG CCGTGCCGCT ATCACTGGTT
GGCACCTTTG CCGCCATGTA TTTCCTCGGT TTTTCCATCA ATAACCTGAC GTTAATGGCA
CTCACCATCG CCACGGGTTT CGTGGTAGAT GATGCCATCG TGGTAATCGA AAATATCTCC
CGGTATATCG AAAAAGGGGA AAAGCCGCTT AACGCGGCGC TGAAAGGAGC GGGAGAAATC
GGCTTCACCA TCATTTCTCT GACCTTCTCA CTCATCGCCG TGCTGATCCC ACTGCTGTTT
ATGGGCGATA TCGTCGGACG CTTGTTCCGC GAGTTTGCCG TAACGCTAGC AGTGTCGATC
CTGATTTCCG CCGTCGTGTC GCTCACGCTC ACCCCGATGA TGTGTGCCCG CATGCTGAGC
CATCAGTCGC TGAGTAAACA GAACCGTTTT ACTCGCGCCA GTGAACGTTT CTTCACTCGC
CTGATTACTG TCTACGGCGT CTGGTTACGC AAAGTACTGA ATCATCCGTG GCTGACGCTG
AGCGTCGCGC TCGGTACGCT GCTGCTCACT ATCCTGCTCT ATATCTGGAT CCCGAAGGGC
TTCTTCCCGA TACAAGATAA CAGCATCATT CAGGGCACCG TACAGGCACC GCAGACGGTC
TCGTTCAGCA ATATGGCTGA CCGCCAACAG CGCGTCGTGT CTATTATCAT GAAGGACCCT
GCGGTAGAGA GCATTTCCTC ATACGTCGGC GTCGATGGCA CGAATGCCGC GCTGAACAGC
GGCCGACTGC AAATCAACCT GAAACCGCTC AGTGAACGCA GTGAGCGTAT TCAGGCGATC
ATCAGTCGCC TGCAACAGCA AACGGCCCAG ATTCCCGGCA TTCAGTTGTA TCTGCAACCG
GTGCAGGATC TCACCATCGA CACCCAGATT AGCCGCACGC AATATCAGTT TACGTTACAA
GCGATGTCGC TGGATGAACT GAGCGTTTGG GTGCCGAAGC TGATGACCGA CTTGAAAAAG
CTACCGCAGC TAGAGGATGT CAGCAGCGAC TGGCAAGACG GTGCTGCGGT CGCCTACGTC
AACGTCGATC GCGACAGCGC CAGCCGTTTG GGCATCACCA TGTCACAGGT CGACAGCGCA
CTGTATAACG CTTTTGGTCA GCGTCTGGTT TCCACTATTT ATACGCAGGC CAGCCAATAC
CGTGTGGTGC TGGAACACGA TACAACCAAC AATACCGGTC TGGACGCGTT GAACGACGTG
CGCCTCATCA GCAGCGACGG CGGTACGATC CCGCTCAGCA GCATCGCCAC GATTGAAGAG
CGTCAGGGGC CGCTGGCGAT CAACCATATC GACCAGTTCC CCTCGACGAC GATCTCTTTC
AACGTCGCCA GCGGCTACGC ACTAGGCGAA GCGGTTGATG CCATCACGCA GGCCGAACAA
CAGATGAATC TGCCTGCGGA TATCACTACC CGTTTTCAAG GCAGTACGCT GGCGTTCCAG
TCGGCGCTGA GCAGCACCGT GTGGCTCATC ATTGCGGCGA TTGTCGCGAT GTACATTGTG
CTCGGCGTGC TATACGAAAG CTTTATTCAT CCGATCACCA TCTTATCTAC GCTGCCAACG
GCGGGTGTCG GTGCGCTGCT GGCACTGATG ATGGCGGGGA ATGAGCTGGA TGTGATTGCC
ATTATCGGGA TCATCTTGCT CATCGGGATC GTGAAGAAAA ACGCCATCAT GATGATCGAC
TTCGCGCTAG CGGCGGAGCG AGAACAGGGG ATGACACCGT ATGACGCCAT TTATCAGGCC
TGTCTGCTGC GTTTTCGACC GATTCTGATG ACCACGATGG CCGCCCTACT CAGTGCGCTA
CCGCTAATGC TGAGCACCGG CGTCGGCGCG GAACTGCGCC AACCGCTAGG GGTCTGTATG
GTCGGTGGCC TGATCATGAG CCAGATTCTG ACGCTGTTTA CGACACCAGT AATTTACCTG
CTGTTTGACC GTCTGGCAGC GCGCTTCCGT CGTGCACCGC ATCAGGAGGA AGAAACCGAG
TGA
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| Protein sequence | MQDTVPASGG GPSRLFILRP VATTLLMFAI LLAGIIGYRA LPVSALPEVD YPTIQVVTLY
PGASPDVVTS AITAPLERQF GQMSGLKQMS TQSAGGASVI TLQFQLELSL DVAEQDVQAA
INAASNLLPS DLPYPPTYSK VNPADPPIMT LAVTSTAMSM TQVQDMVDNR IAQKISQVAG
VGLVSLAGGQ RPAVRVRLNA PALAAYGLTS ETIRTAITAA NVNSAKGSLD GPTRSVTLSA
NDQMKSVDDY RRLIVAWKNG APVRLQDVAT IEQAAENIHL GAWANRQQAI IINVQRQPGA
NVITTTDSIN KMLPALKASL PNAVEVTTLT DRTTSIRASV KDVQFELLLA IALVVMVIYL
FLRNAVATLI PSIAVPLSLV GTFAAMYFLG FSINNLTLMA LTIATGFVVD DAIVVIENIS
RYIEKGEKPL NAALKGAGEI GFTIISLTFS LIAVLIPLLF MGDIVGRLFR EFAVTLAVSI
LISAVVSLTL TPMMCARMLS HQSLSKQNRF TRASERFFTR LITVYGVWLR KVLNHPWLTL
SVALGTLLLT ILLYIWIPKG FFPIQDNSII QGTVQAPQTV SFSNMADRQQ RVVSIIMKDP
AVESISSYVG VDGTNAALNS GRLQINLKPL SERSERIQAI ISRLQQQTAQ IPGIQLYLQP
VQDLTIDTQI SRTQYQFTLQ AMSLDELSVW VPKLMTDLKK LPQLEDVSSD WQDGAAVAYV
NVDRDSASRL GITMSQVDSA LYNAFGQRLV STIYTQASQY RVVLEHDTTN NTGLDALNDV
RLISSDGGTI PLSSIATIEE RQGPLAINHI DQFPSTTISF NVASGYALGE AVDAITQAEQ
QMNLPADITT RFQGSTLAFQ SALSSTVWLI IAAIVAMYIV LGVLYESFIH PITILSTLPT
AGVGALLALM MAGNELDVIA IIGIILLIGI VKKNAIMMID FALAAEREQG MTPYDAIYQA
CLLRFRPILM TTMAALLSAL PLMLSTGVGA ELRQPLGVCM VGGLIMSQIL TLFTTPVIYL
LFDRLAARFR RAPHQEEETE
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