| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1242 |
|---|
| Symbol | |
|---|
| ID | 8529631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1357738 |
|---|
| End bp | 1358463 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | RNA methyltransferase, TrmH family, group 1 |
|---|
| Protein accession | YP_003258663 |
|---|
| Protein GI | 261820557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.626014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACA ATATTCGCAT TGTTCTGGTT GAAACGTCGC ACACTGGCAA TATGGGGTCG
GTGGCCAGAG CGATGAAAAC CATGGGATTA AGCAAACTCT ATTTGGTCAA TCCACTGGTT
AAGCCTGATT CGCAGGCGAT TGCGCTGGCG GCCGGTGCCA GCGATGTCAT TGGTAATGCT
ACGATTGTTG ATTCGCTCGA TCAGGCGCTT GAGGGTTGTA GTCTGGTCGT TGGCACCAGT
GCGCGTTCTC GCACGTTGCC CTGGCCGATG CTGGACCCGC GTGAATGCGG CGTTCGCAGC
GCGCAGGAAG CGGAGCACGC GCCAGTGGCA TTGGTGTTTG GGCGTGAACG TGTCGGGCTG
ACGAATGATG AACTTCAAAA ATGCCATTAT CACGTGGCCA TTCCCGCTAA TCCGGAATAC
AGCTCGTTAA ATCTGGCGAT GGCGGTGCAG ATTATTGCTT ATGAAGTCCG TATCGCGCAT
TTGGATCGGT TACAGGTCGG TAAGCCGGAA CATGAAGAGT CGCCGTATCC GCTGGTCGAC
GATCTGGAGC GCTTTTATCA GCATCTTGAA GAGACATTGC TGCAAACCGG ATTTATCCGA
CCAGCACATC AGGGGCAGGT GATGAACAAG CTGCGTCGCC TGTTTACCCG CGCCAGACCT
GAAGCACAGG AACTTAACAT CCTGCGTGGG ATACTGAGTT CGGTACAGAA AACACACGAC
GAATAA
|
|---|
| Protein sequence | MLDNIRIVLV ETSHTGNMGS VARAMKTMGL SKLYLVNPLV KPDSQAIALA AGASDVIGNA
TIVDSLDQAL EGCSLVVGTS ARSRTLPWPM LDPRECGVRS AQEAEHAPVA LVFGRERVGL
TNDELQKCHY HVAIPANPEY SSLNLAMAVQ IIAYEVRIAH LDRLQVGKPE HEESPYPLVD
DLERFYQHLE ETLLQTGFIR PAHQGQVMNK LRRLFTRARP EAQELNILRG ILSSVQKTHD
E
|
|---|
| |