Gene Pecwa_1233 details

Gene Information

• Locus tag: Pecwa_1233
• ID: 8529622
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1348119
• End bp: 1348727
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 50%
• Product: protein of unknown function DUF1007
• Protein accession: YP_003258654
• Protein GI: 261820548

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGGCT TGGCACTCTG CCAGCCCGTT TTCGCTCACC CACACAGTTT TATTGATATG 
CAGACGACAG TTGAGAGTCA GAACGACAAC ATCACCGGTT TACGTATGCA GTGGACGATG 
GACCCTATCA CGTCTGCCGA CTTGCTATAT GACGCAGGAA AGGCGACAAA AGATTCTGAA 
GTCTGGAAAA AACTGGCGGC GGAAGTCATG GCTAATGTGC TTGGTCAACA CTATTTCACT 
GATATTTATC GCGATAATCA GCCCGTGAAA TATGCACGGC TGCCAACCGA GTATCACCTT 
TCCCGCAAAG GCAATCAGGC GGTGCTGGAA TTTGTGCTAC CGCTGTCACA TCCTCAGCCA 
CTGGCCGGAA AGCCGCTGCT GATTTCTACT TACGACCCGA CCTACTTTGT CGATATGTCC 
TATCAGGATG ATAAGGCCGT TAAGCTGGCC CCTGAGCTGG TATCTCGCTG TAAAACCACG 
CTTGTCACGC CGAAGCCCAA CGCTGAACTG CAATCCTATG CGCTATCACT GGACAAAAAT 
GATGCTCCAG ATGAAGACAT GGATTTGGGA AAACAGTTTG CACAGCGGGT GACGTTACAA 
TGTCAGTGA 

 

Protein sequence

MTGLALCQPV FAHPHSFIDM QTTVESQNDN ITGLRMQWTM DPITSADLLY DAGKATKDSE 
VWKKLAAEVM ANVLGQHYFT DIYRDNQPVK YARLPTEYHL SRKGNQAVLE FVLPLSHPQP 
LAGKPLLIST YDPTYFVDMS YQDDKAVKLA PELVSRCKTT LVTPKPNAEL QSYALSLDKN 
DAPDEDMDLG KQFAQRVTLQ CQ