Gene Pecwa_1171 details

Gene Information

• Locus tag: Pecwa_1171
• ID: 8529554
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1265107
• End bp: 1267125
• Gene Length: 2019 bp
• Protein Length: 672 aa
• Translation table: 11
• GC content: 57%
• Product: iron-hydroxamate transporter permease subunit
• Protein accession: YP_003258592
• Protein GI: 261820486

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAACT CTCTGTCTGT CGCGCATAAT CGTGCCGTGC ACCCGTTAGT ACTTCCCATT 
GTTTCAATTG GTTTTCTGCT GTTCGTGACT GTGGGGATGG GTAGTTATAA TTTGCAGCAG 
CAATTACCGG TATCTCTGTG GTTTCAGGCA CTGACACAGC CTGCGTTAGA AGATATGCAG 
CAACTGCTGT TTCACTACAG TTTACTGCCG CGCATGGTAT TAGCCCCGCT GATTGGCGCG 
GGGCTGGGGC TGTGTGGCGT ACTGTTCCAA CAGGTTTTGC GCAATCCGCT GGCCGAACCA 
TCAACCTTGG GGATTGCCAC CGGCGCACAC TTAGGGATCA CAATCGTGAC GCTATGGGCG 
CTGCCCGGTG GCACATGGAT TCAACAAGCT GCGGCTATGA TTGGTGCGCT GGTGGTTGGC 
GCGCTGGTGT TTGGTGTCGC CTGGGGCAAG CGATTATCGC CAGTGACGCT GATACTGGCA 
GGGCTGGTGC TGAGTTTCTA TTGTAGTGCG GTCAACCAGT TGCTGGTGCT TTTCCACCAT 
GAGCGGCTCC AGGGGTTGTT CCTGTGGAGC AGTGGCGTGC TGAACCAGCA GGACTGGAGT 
AATGTGCAAT TTGTTTTCCC GCGTCTCGTG GTGTGTTTCT GTCTGGCGCT GCTTCTGATT 
CGCCCGCTAA CGCTGCTGGG GTTAGATGAC GGCGTTGCGC GTAATCTGGG GCTTGGGCTG 
TCGCTGGCGC GTTTTAGTGC GCTTGGGCTG GGGATTTTTC TGTGCGCCCA ATTAGTGAAT 
GCGGCGGGCA TTATCGGGTT TATCGGCCTG TTTGCGCCGC TGCTGGCGAA AATGTTGGGT 
GCACGGCGCT TGCTTCACCG CCTCTTATTC GCACCGCTGC TCGGTGCGCT GCTGCTGAAT 
GTTGCCGATC AGGGGGTTAT CTGGCTAAGC CGTATCTGGT TTGAAGTTCC TACGGGGGCG 
GCGACGGCGT TGATTGGTGC GCCTCTGCTA CTGTGGCTGC TGCCTCGTCT GCGTAATAGC 
ACCCAACCCG CGATGGTCGA CAGTAATAGC ACGCCGACGG CTGAACGCAG CCTATGGGGA 
ACGTGGCTGG TGCTTGGTAT TGTACTGCTG GGAATGGTGG TTATTACGGC GCTGATGTTG 
GGGAAAGATG CAGAAGGCTG GCAATGGGGC GGTGGTGATG TACTCGCGCA ATTGCTTTCA 
TGGCGTTGGC CTCGGGTTCT GGCGGCGCTA ACCGCCGGAG TCATGCTGGC GGTGGCGGGA 
ACGCTAATCC AAAAACTGAC GGGCAACCCG ATGGGAAGCC CGGAAGTGCT GGGAATTAGC 
TCTGGCGCAT CGTTTGGCGT CATTATTTTA CTATTCTTCA TTCCCGGCAA TGCGTTCGTG 
TGGTTGCTTC CCGCCGGTAG TGCGGGTGCG GCGTTGTCGC TGTTGGTTAT GGTGATTATC 
GCCGGACGCG GTGGTTTCTC TACGCAGCGA ATGCTGCTGA CGGGGATCGC GTTGAGTATG 
GTGTTTTCCA CCGTGATTGC GCTGCTGTTG GCTAGTGGCG ATCCGCGTAT GGGAACGGTG 
TTGACCTGGC TGTCAGGTTC AACCTATGCG GTCGAACCTG TCGACGCGAT ACGCACGGCG 
GTGATTGCCG TCTTGCTGCT GTTGATCGTC CCGCTGTGCC AGCGTTGGCT GCGTATCCTG 
CCGCTGGGTA CGACAACGGC CAGAGCGCTC GGTGTGGCCG TCACACCAGT CCGCCTGCTG 
GTCTTGTTGC TGGCATCGGT GCTGACCGCG ATGGCAACCC TGATGGTCGG GCCGATGAGC 
TTTGTTGGCC TCATGGCACC GCATATGGCG CGGATGCTAG GCTTTAGCCG TGTGTTGCCG 
CAAATCGCCA GCTCTGCGCT GATCGGTGGT GCGCTAATGG TTATGGCTGA CTGGTTGGGT 
CGGATGATCC TCTTTCCGGC ACAGATCCCG GCAGGGTTGC TCGCAACATT TATTGGCGCA 
CCTTACTTTG TGTATCTGCT ACGCAAACAG GTGAAATAA 

 

Protein sequence

MPNSLSVAHN RAVHPLVLPI VSIGFLLFVT VGMGSYNLQQ QLPVSLWFQA LTQPALEDMQ 
QLLFHYSLLP RMVLAPLIGA GLGLCGVLFQ QVLRNPLAEP STLGIATGAH LGITIVTLWA 
LPGGTWIQQA AAMIGALVVG ALVFGVAWGK RLSPVTLILA GLVLSFYCSA VNQLLVLFHH 
ERLQGLFLWS SGVLNQQDWS NVQFVFPRLV VCFCLALLLI RPLTLLGLDD GVARNLGLGL 
SLARFSALGL GIFLCAQLVN AAGIIGFIGL FAPLLAKMLG ARRLLHRLLF APLLGALLLN 
VADQGVIWLS RIWFEVPTGA ATALIGAPLL LWLLPRLRNS TQPAMVDSNS TPTAERSLWG 
TWLVLGIVLL GMVVITALML GKDAEGWQWG GGDVLAQLLS WRWPRVLAAL TAGVMLAVAG 
TLIQKLTGNP MGSPEVLGIS SGASFGVIIL LFFIPGNAFV WLLPAGSAGA ALSLLVMVII 
AGRGGFSTQR MLLTGIALSM VFSTVIALLL ASGDPRMGTV LTWLSGSTYA VEPVDAIRTA 
VIAVLLLLIV PLCQRWLRIL PLGTTTARAL GVAVTPVRLL VLLLASVLTA MATLMVGPMS 
FVGLMAPHMA RMLGFSRVLP QIASSALIGG ALMVMADWLG RMILFPAQIP AGLLATFIGA 
PYFVYLLRKQ VK