| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1051 |
|---|
| Symbol | |
|---|
| ID | 8529425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1138897 |
|---|
| End bp | 1139721 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_003258475 |
|---|
| Protein GI | 261820369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTGA GTGGTGTTGC GCTAGCCGCA TCATTTATTC CCACGATTGC CCACGCTGAT
GTGCTGGAAA AAATTGCCGA TCGCGGCGTG ATTTCGGTCT GTACTAACGT CAATAACCCA
CCACTGGCCT TCCTGGAGTC CTCGGGAGAA ACCAAAGGTC TGCACATCGA TCTGCTGAAT
GACTTTACTC AACGGCTGTC CACGCAACTG GGTAAAACGG TCAAAGTGGA TCTGGTTCCT
GTTTTGCCCG CAAACCGCGT GCAATTCCTG CAACAGGGCA AATGCGACAT TCTGTTTACT
TCATTGACGG TCAGTGAAGA GCGCAAGAAG TTAGTACAAT TTGTCGAACC TTACTATTAC
GCCGCGGGTC CAGCGCTGCT GACGAAGAAA GGCGTAACCT TCTCGAACTG GGAAGAAGTG
AAAGGCAAAG CGATTTGTAG CAACCAAGGA TCGAGCTGGA ACGTACCGTT AGAACAGAAA
TTTGGTGCCA ACATCGTTGC TTTCCAGACT CAGCAAGAAG TCGATCAATC CTTACGTGAC
GGACGCTGCG CCGCACTCGT ATCCGATGAC AGTTATCTCC AGGCGCGTTT TCTTAACGAC
AAAGAAGGCA TCTGGAAAGA TTACTTCATT CAAAATCTGA CACCGTTTAC CGAAGGCCCG
TGGGGTCTGG CGGTTCGCTT TAACGAACCA CAGTTTACTC AATTCATTTC CAGCGTGATC
AAAGACTGGA ACAAGCAAGG CACCATCATT GAACTGGCGA AAAAATGGGG CCTAAAACCG
GCACCGTTTG CAGTAAAAGC CCACGAAGAA GCCATTAAGC TATAA
|
|---|
| Protein sequence | MTLSGVALAA SFIPTIAHAD VLEKIADRGV ISVCTNVNNP PLAFLESSGE TKGLHIDLLN
DFTQRLSTQL GKTVKVDLVP VLPANRVQFL QQGKCDILFT SLTVSEERKK LVQFVEPYYY
AAGPALLTKK GVTFSNWEEV KGKAICSNQG SSWNVPLEQK FGANIVAFQT QQEVDQSLRD
GRCAALVSDD SYLQARFLND KEGIWKDYFI QNLTPFTEGP WGLAVRFNEP QFTQFISSVI
KDWNKQGTII ELAKKWGLKP APFAVKAHEE AIKL
|
|---|
| |