Gene Pecwa_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1042 
Symbol 
ID8529416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1128298 
End bp1129491 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content55% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003258466 
Protein GI261820360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACCT GGAAACTTAA CCTCTTCTCT GCCTGGCTGG GATGCTTTTT CACCGGGTTG 
GCCATGAGCC AGATACTGCC CTTCTTGCCG CTGTACATTG AGCAGCTCGG TGTTAATTCA
CACGAATCGC TGAGCCTGTG GTCTGGTTTG ATCTTCAGCT CGTCTTTTCT CATTTCTGCC
GCCGTGGCAC CACTGTGGGG AAGCCTCGCC GACCGTAAAG GTCGCAAGCT CATGCTGCTG
CGCGCCGCAC TCGGTATGGC GATCGTGATG TCGCTGCAAG GGTTGGCGAC TAACGTGTGG
CAGTTGTTCA TCCTGCGTTC GTTAATGGGG CTGACCTCCG GCTACATTCC TAACGCGATG
GCGCTGATCG CCTCGCAGGT TCCGCGTGAA AAAAGCGGTT GGGCGCTGGG TATGCTATCA
ACCGGGCAGA TCGCTGGTGT CATCCTCGGC CCCTTATTCG GCGGCTTTAT GGCCGATTAT
ATTGGGCTAC GCATCGTCTT TTTCATCACC GGCGGCCTGC TGTTTACCAG CTTCCTGATT
ACGCTTTTCG CGATTAAAGA GAGCGTGGTG AAGGTCACAA AAGAGAATCG ACTCAGCGGG
AAAGCCGTTT TTGCTTCGCT GCCTTATCCA ACGCTCATCA TCTGCCTGTT CATTACAACG
ATGATGATCC AGATGGCAAA CGGCTCCATC AGCCCCATTC TCACCTTGTT CATCCGCGAT
CTGGCTCCCG GTACGGACAA TATTGCCTTT ATCAGCGGCG TAATTGCCGC CATTCCCGGC
GTATCCGCGC TGCTATCGGC ACCGCGTCTT GGCCGCTTAG GTGACCGAAT CGGCGCACAT
CGCGTCCTGA TCGCCGCATT GGCGATCAGC GTGCTGCTAT TCTTGGTTAT GGCAATGGTA
CAGAGTCCGA CACAGCTTGG CATTCTGCGC TTCATGCTGG GCTTTGCCGA TGGCGCACTG
ATGCCAACCG TGCAGGCGCT ATTAGTCAAA TACAGCAGCC AGCAGGTAAC AGGCCGTATC
TTTGGCTATA ACCAGTCATT TATGTATTTG GGCAACGTGC TGGGGCCGCT GATGGGCTCA
GGCGTATCCG CCCTGATGGG ATTCCGTTGG GTATTCGTCG TCACCGCTTT TCTGGTGCTA
TGCAACACGC TGCAACTCTT TTTCGTCTTC AGAAAACCGC GCGGAAAAGG ATAA
 
Protein sequence
METWKLNLFS AWLGCFFTGL AMSQILPFLP LYIEQLGVNS HESLSLWSGL IFSSSFLISA 
AVAPLWGSLA DRKGRKLMLL RAALGMAIVM SLQGLATNVW QLFILRSLMG LTSGYIPNAM
ALIASQVPRE KSGWALGMLS TGQIAGVILG PLFGGFMADY IGLRIVFFIT GGLLFTSFLI
TLFAIKESVV KVTKENRLSG KAVFASLPYP TLIICLFITT MMIQMANGSI SPILTLFIRD
LAPGTDNIAF ISGVIAAIPG VSALLSAPRL GRLGDRIGAH RVLIAALAIS VLLFLVMAMV
QSPTQLGILR FMLGFADGAL MPTVQALLVK YSSQQVTGRI FGYNQSFMYL GNVLGPLMGS
GVSALMGFRW VFVVTAFLVL CNTLQLFFVF RKPRGKG