| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0895 |
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| Symbol | |
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| ID | 8529268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 950014 |
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| End bp | 951441 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003258320 |
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| Protein GI | 261820214 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.276547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGT TTTCGCTGTT TTTGAAATCG GACGCTCGGG GAACGTGCAA ACGGTTGCTG
ATTGCCAGCC TGTTTAATGC AGTATTGCCT GTCATGCTGA TGTCGCCTGC GGCCACGCAG
GCTGCTGGGG TATCTGTAGC ACCTGTCACC GATGAGGTAC ACCTGACGGT GCATCAGGGG
CGGTTACTCC ACCTTGATGC GTTGCCGGAC AGCGTGCTGG TGGCCGATCC GAATATTGCC
AGTTTTGAAC TGCCTTCGCC GGGTAATCTG TTTGTTTACG CCAAAAATGT CGGGACTACC
ACGCTCTATG CGATGGATGA AAATGGCAAA GTGATTAACG CCATCCGCCT GGTATCTGAA
CACGATCTGA AAGCGCTAAG CGAGCGTATC AAGCGTGAAT TCCCCGGTGC GGATATCCAA
CTGGAAGCCT CGATCCCCAG CGGCGTGATT GTGCGCGGTA GTGTAGATAC ACCGCAGGAT
GCCAAGCGCG TCATCGACAG TATACAGACG TACATCAACG CGTCTTCAAA CGGTGCACAA
GGTGGCGGCG GGGGCGGTGA CCAATTGCCA GGTTCCAGCG AAACATCTGG CAAAGTGGTC
AATCAGCTTA AAATCAAAAC GCCTTCGCAA ATTAATATCC AGGTGCGCGT GGTGGAAGTG
TCTCGCAAGT TGACCAGCGA ACTGGGGTTC AACTGGGCGG CATCGCTGAG TACTGGTAGC
GGAAATATGA CTGCGGGCAG CGGGTCACGT CTTAATCTGT TCAATGCCAC GACTGGGAGA
TTCGCGAACC CAACGGATTC TGGCTTCCTG AACTTCGGCC GCTCCAGATT GGGCGGATTG
TTAACTGCCA TGAATCAGCA GGGTATGGCA ACCGTATTAG CCGAACCCAA CCTGACGGCG
ATGTCAGGGG AAACGGCTGC ATTTGCCGCA GGCGGTGAGG TTCCTATCGT CCTGATCACC
AATAACAGCG TCAGTATCGA TTACAAATCC TACGGCGTGA TCCTGCGTAT GACGCCGACG
CTGCTGTCTG CCAACCGTAT CAGCCTGCAC ATTGCGCCAG AAGTCAGTGA ACTTACAGAT
GTGGGTTCCG TACAGTTGGA AGGCGGCTCG CGTATTCCAG CATTAACGGT ACGTCGTGCG
GATACTACGG TAGAACTGGC CAGCGGGCAA AGCTTTGCCC TGGCAGGGAT GTTGCGCAGC
GCCGGTAGCC AAACGATAAA CGGCGTGCCG GGGCTGAGTG GTATCCCGAT GTTTGGTCGT
CTGTTTGAAA GCGAATCCAC CAACCACGAA GAAACGGAAC TGGTGATCAT CGCGACCGCC
TACGTCGTCG AACCTGTTAA CGCGGGCGAC CTCCAGACGC CGGGGCAAGG CATAAGAATG
CTGGATTCGT CCATGCCGCG TTCTGCGTCT ATCGGCTATC TCTATTGA
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| Protein sequence | MTMFSLFLKS DARGTCKRLL IASLFNAVLP VMLMSPAATQ AAGVSVAPVT DEVHLTVHQG
RLLHLDALPD SVLVADPNIA SFELPSPGNL FVYAKNVGTT TLYAMDENGK VINAIRLVSE
HDLKALSERI KREFPGADIQ LEASIPSGVI VRGSVDTPQD AKRVIDSIQT YINASSNGAQ
GGGGGGDQLP GSSETSGKVV NQLKIKTPSQ INIQVRVVEV SRKLTSELGF NWAASLSTGS
GNMTAGSGSR LNLFNATTGR FANPTDSGFL NFGRSRLGGL LTAMNQQGMA TVLAEPNLTA
MSGETAAFAA GGEVPIVLIT NNSVSIDYKS YGVILRMTPT LLSANRISLH IAPEVSELTD
VGSVQLEGGS RIPALTVRRA DTTVELASGQ SFALAGMLRS AGSQTINGVP GLSGIPMFGR
LFESESTNHE ETELVIIATA YVVEPVNAGD LQTPGQGIRM LDSSMPRSAS IGYLY
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