Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0629 |
Symbol | |
ID | 8528994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 670437 |
End bp | 671996 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | type II secretion system protein E |
Protein accession | YP_003258060 |
Protein GI | 261819954 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGG ATAACCATCA ATCAGCTGAT GCCGATTTGG CCTGCCGCGT TCCAGAGCCA TACCGTGATG ACATTGAGCT CATTCGTCTT GATAACGAGT CTGTGAGTGT GCGCATTAAC CGGGAAATTA GTAAGGAGCC GGAATTCATC AGCTGGTTTG CCGGATTGCG CCGGGCCGGG CTGAAGCCAT TGCCGCCTGA ATTCGTGATG AAAAGTGAGC TTGGTCAGGT AGGGCTGGCC AATACGCATG ATGTGGAAGC GGGGATCAGT GGTGCTCAGC GCGAGGTCCG TCGGATGTTC CGCGATGTCA TCTCGATGAG CGCCTCTGAT ATTCACGTAC ATCTCGACCG TCGCCAGGGA AGTCGGATCC GTACCCGGAT CAATGGGTTG TTGTACACCA TTCGTGAACC GGATTTTGAA GAGGGAGGAA CGCTGCTGTC GACTATGGTG GAAAGTATGT GTGACACCAA ATCTCAGGGT TACAACCCGC GTGTTGCTCA GGATGGTCGT GTTAAACCTG AATTTCTGGC GGATATGAAT TTGTATGCAG CCCGCTATAG CCATCGTCCG ACTGACGATG GTGGTGTTTT TGCGGTGATG CGCCTGATTG AAGACGATCG TGGGCGTACC CGAACGCTGC AAAGCTTAGG CTATCAGCCG GAGCATGAAG CGGCGGTGGA AGAAATTGAG CTGACATCAC AGGGACTTAT CGGTCTGTGT GGGACGACCG GGTCGGGTAA ATCCACTACG CAAAGGGTAC TTGCAAGTCG ATGGCTGGCC AGAAACAACG GACAGGTCAG TCTACAAACC CAGGAAGCGC CGATTGAAGG GCTGATTTTG GGCGCAGTGC AGTGTGCCGT TAATACCGAC AATCTCAGTC TGCATCAGGC GGGAGAAGCC TGGGCGGGCA GTGTGGTGAT GTCCATGCGT CTTGACCCGG ATGGTATCTA TACCGGAGAA GCCCGCGACT ACGCATCAGC CTACGCTGCA TTGGAAACGT CCGTCAGTGG CCACCCTGGC TGGTTTGGGC TCCATTGTAC CTATCCGCTG GATGCACTGA CCCGCATGCG TAACTGGGGA ATTGATGCGC GTGAGCTGGC GAACCCGACG TATTTTCGGG GACTGATTGC CCAGTCGTTG GTGAATACGC TCTGCCCGTC CTGCTCATTG CCGTGGTCTG AAGCCCTTAA ACGTCAGTTG ATCCCAGCTT CGCATCAGAC GCTGGCAAAG CGCATGTTTA ATGCGGATGA GCTTGAGCAG TTACGTTTTC GAAACCCTGA CGGTTGCGGT AAGTGCACGA AGCAATTGCT GGGAACCGCG ATTAACCAGG GGATTAGTGG ACGAACCATC GTGGCTGAAA TCGTGCGCCC CGACCGTCAT ATCATGAAAA GCTGGCTGGA AGAGGGGAGT TTTGTGGCGC GCCGGCTCTG GCTTCAGGCG GGCGGGTTTA GTCGTGGGCA GCATTTGCGG CGTCTGCTGC TGGCTGGTCA GACAGACCTT GTGATGGCCA CAGAGCACAT GGATCCCGAT GAAGACCGCG ATTTTAGGGA GTGCGTCTAG
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Protein sequence | MKTDNHQSAD ADLACRVPEP YRDDIELIRL DNESVSVRIN REISKEPEFI SWFAGLRRAG LKPLPPEFVM KSELGQVGLA NTHDVEAGIS GAQREVRRMF RDVISMSASD IHVHLDRRQG SRIRTRINGL LYTIREPDFE EGGTLLSTMV ESMCDTKSQG YNPRVAQDGR VKPEFLADMN LYAARYSHRP TDDGGVFAVM RLIEDDRGRT RTLQSLGYQP EHEAAVEEIE LTSQGLIGLC GTTGSGKSTT QRVLASRWLA RNNGQVSLQT QEAPIEGLIL GAVQCAVNTD NLSLHQAGEA WAGSVVMSMR LDPDGIYTGE ARDYASAYAA LETSVSGHPG WFGLHCTYPL DALTRMRNWG IDARELANPT YFRGLIAQSL VNTLCPSCSL PWSEALKRQL IPASHQTLAK RMFNADELEQ LRFRNPDGCG KCTKQLLGTA INQGISGRTI VAEIVRPDRH IMKSWLEEGS FVARRLWLQA GGFSRGQHLR RLLLAGQTDL VMATEHMDPD EDRDFRECV
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