Gene Pecwa_0555 details

Gene Information

• Locus tag: Pecwa_0555
• ID: 8528920
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 589611
• End bp: 590408
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 55%
• Product: TatD-related deoxyribonuclease
• Protein accession: YP_003257990
• Protein GI: 261819884

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.41598
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTTCTG AACGACACCG TTTTATCGAT ACCCACTGTC ATTTCGATTT CCCCCTATTC 
TACGATGATG CACCAGAAAG TTTGCGTCTG GCACGAGACG CTGGGGTGGA ACGCATTATT 
ATTCCAGCCG TTGCTTCTCA GCACTTTGAG CGCGTGTTGA CGCTCGCTCA TACCTACTCT 
CCGCTTTACG CCGCGCTTGG CCTTCATCCA CTTTATATCG CCGAGCATCA GGAGAACGAC 
CTGCTCCGTC TGGAAGATGA ACTCAGCCAA TTGCCTGCAA AGCTGGTGGC GATAGGGGAG 
ATTGGGCTGG ATCTCTATAT GCCGGAACCG CAGTTCGAGC GGCAGCTTAC TTTCCTGGAG 
GCGCAGCTTC GGCTGGCGAA AAAATACGAT CTTCCAGTGA TCCTGCATTC GCGCCGCAGC 
CATGACAGAC TGGCACAATT ACTCCGGCGT CTTGACGTGC CACGCACTGG TGTGGTCCAC 
GGTTTTGCCG GCAGTCTGGC ACAGGCGCAG GCTTTTATCC GGCTGGGTTA TTACATCGGT 
GTAGGGGGAA CGATTACCTA TGACCGAGCG AATAAAACCC GTCAGGCAAT CGCGCAACTA 
CCGTTAGAAC GGCTGCTGCT GGAAACGGAT GCACCCGATA TGCCGATGAG TGGTTATCAG 
GGGCAGCCAA ACCGACCTGA GCGTATTCCT TGTGCGTTTC AAACACTGTG TGAGCTGCGT 
ACTGAACCGC CCGAGGAGAT TGCCGAGGCG CTCTGGCAGA ATTCGCTCAG GCTATTTGAA 
CGGCTCACCC TGGCATAG 

 

Protein sequence

MPSERHRFID THCHFDFPLF YDDAPESLRL ARDAGVERII IPAVASQHFE RVLTLAHTYS 
PLYAALGLHP LYIAEHQEND LLRLEDELSQ LPAKLVAIGE IGLDLYMPEP QFERQLTFLE 
AQLRLAKKYD LPVILHSRRS HDRLAQLLRR LDVPRTGVVH GFAGSLAQAQ AFIRLGYYIG 
VGGTITYDRA NKTRQAIAQL PLERLLLETD APDMPMSGYQ GQPNRPERIP CAFQTLCELR 
TEPPEEIAEA LWQNSLRLFE RLTLA