| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0470 |
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| Symbol | |
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| ID | 8528834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 506027 |
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| End bp | 509029 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | virulence protein SrfB |
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| Protein accession | YP_003257914 |
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| Protein GI | 261819808 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCTG AACTCACTGA TTTTAAAAAA CAGGTCAAAC TCATTCGTGA CAGCGGGATC
CAATTTCTTG ATTTTGCTTT TACGTTACCT GCACGTAAAG AGTACGGTGA ATTTCTACGC
CAGCAAGGTG ATGGCCCTGT TCTACGGCTG GTCTATAACG AGCGCGAAGA TAAGTACCAC
ATTCCAGCGC ACGATAACGA AATGCCACGC TCCGTCGAGT CAGAATATTC TCTGGCAATT
GAAGACTCAT TACGGCTGTA TCAGGGCGTC TGGGTTCCTC TCCCCTATTT CCGCTTCAAC
CCGCCACGCG CCTTTTCACA AGGGCCAGCC AACTGGGCTC GCGTTCAATT TCATGAACTA
ACTGAACCGG ACGATAAGGG TAACACCTGG CGCGCCACTC TGATTTTTGA TACTAAAATT
TTTCCCGATC GTGAAAACAC CCAGTATCTG GCTCCCAGTG AGGATGACGT TCGTTCTGGT
GCAGGCTTTG CGCTAGCCAA ACACGTACAC GAAATGGGCG ATTTTCTTTC CCAACACTGG
GTAGAGGAAT GGCTGAAGGA TGTCTACACC ACCCAAGCGC GCGAGCGATT ACGCCAGCAC
TATGAAGATA ATGAAGAAAA GCTGGTGCTT AAAGAACATC AGGCGCATTA CCTGAATCTT
CTCAGTGTGC TGGGCGACAC CATTCACGTC CCGGAAGTAC AGGTTAACGA CGTCAAAATT
CGCGATACAG CAATCCCTGT CGATCTGGTG CTAGATATTG GCAATTCGCG AAGCTGCGGT
ATTCTTATTG AAGAGCATCG TGATGATAAT AAAGGATTAT CACAACTCTA CCAGCTACAG
CTACGCGACC TGAGCCAACC CCAATATGTC TATAATGAAC CATTTGACAG CCGGCTGGAA
TTTGCTCAGG CAGAGTTTGG TAAGCAGGAT TTTTCGCTAA AAAGCGGCCG TAGCGACGCC
TTTACGTGGC CAACAATCGG CCGAGTTGGC GGTGAAGCCT TCCGCATGGC AGCCCAACGC
CTTGGTACTG AAGGCTCAAC GGGCATTTCC AGTCCGAAAC GATACCTCTG GGACGATCAA
TCCTATTCAC CCGGCTGGCG ATTCAGTCAG GCCTTCGTGA AATCGGATCG TGAGCCGCTG
GCGACGGCGG CCCCCTTGCT CTACATGCTT AACGATCAGG GCAAATTATT GATACGCCTG
CCCGAAGATG AGCGGATGCC CGTCTTTTCA CCGATTTACA GCCGCAGCTC ACTAATGACC
ATGATGTTGT CAGAAGTGTT GAGTCAGGCG CTAATGCAAA TAAACAGCCC GGCACAACGG
TTGAAGATGA ACCATGCCAG CACACCACGC CGCTTGCGTA ATGTCATTAT GACTGTGCCA
CCCGCCATGC CGAAGCCCGA ACGCGCCATT TTCGAACAAA GCATGCACGA TGCAATTCGT
CTGGTGTGGA AATCTCTCGG CTGGGAAGCG ATGGAATATG AAGGTAGCGA TACGCAGCAG
TTGAAGCATC CCCACCCAGG TGTACATGTC AAATGGGATG AAGCGACCTG TGGTCAACTT
GTCTACCTGT ATAACGAGAC GCAAAATTAT TTTGGCGGAC GCACCGACGA ATTCTTTTCC
GCCACCCGCC GTCCAGATAA TCAGATGTCA GGAACGGAAA AACGCAGCCT GAAAGTAGCC
TCAATCGATA TTGGCGGAGG CACGACAGAT CTGGTGATTT CCCGCTACAC CCTGGATGAA
GGTCAGGGCA TTAATGTACG CATCATCCCG AAACAGTTAT TCCGCGAAGG ATTCAAAGTG
GCGGGAGACG ATATTCTGCT TGATGTCATC CGCCTTTATC TACAGCCGGC GGTAAAAGCC
GCGATGATGA ACGTGGGACA CAGCGATGTT GCGTCCGAGT CGATAATGTC ACAACTGTTT
GGCAGCGAAT CGATTGAGGC TGGCAAACAA GTATTGCGTC AGCAATTGAC GCTGCAAATC
TTCGCGCCGC TGGCACTAGC GATTTTGCAC CGCTACGAAG AGTACCAGCC CGATGAGGGA
CGTGAGCTTC TTAGTTACAC GTTTCGTGAG CTATTGGAGA TCAATGTACC AACGCAAAAA
GTACAGGACT ATGTAAACGA CGCCGTTCGT CCTGGGCAGG ACAGCGGCTG TGTTCCGTTC
TCGATCCTTG ATGTTCCGTT AGAGGTCGAT TTATCCCAAT TACATAATGA ATTTATCAAT
CCGCGTAGCG GCCGGATGAA TATTTGCCAC AGTCTGCGTG CGCTGTGCGA AGTCCTGTGG
CATTACAACT GCGATATTTT GTTGCTGACG GGTCGTCCAT CACGTTTGCC CGGCATTCAA
GCGCTGATCC GCCAGTTACA GCCAGTCCCA CCGTCACGCG TGCTGCCGTT ACATGGGTAT
GAAACTGGCG GCTGGTATCC GTTTAACAAA AAGGGATGTA TTGACGATCC CAAGTCTACC
GCTGTCGTCG GGGCCATGCT CTGCCTGCTG GCAGAAAACT CCAGGCTGAA TAACTTTTAC
TTCCGCACGG CAAACTTTGT GCCCTATTCC ACCATTCGCT ATCTGGGCAT GCTGGACGGT
AACAATATCA TCAAAGACAG TAACGTATTT TATCGGGATA TCGATCTGGA TGCCGAGAAC
TTCCAGCTTG ATCAGGCGCA AGGGTTTGAG TCCCGTGGCG AAGTCCGCAT TGGTTTCCGA
CAGCTTGACA ATGAGCGCTG GCCCGCATCG GCACTGTACA CCTTGAAAAT AACCAACCCC
AACCTTGCCA GCGAACTTGC AGGCGATGCC GTTATGCGTT TGCAACTGCT AGCCGAGCAG
GGACGCCCCC GCAATGGTGA AGAAGCCGTC AGCCCAGAGC GATTCCGCAT TGAATCGTTG
GAAATGGAGA ATGCACGCCG TAACTACGGT CGCAAAGATG TTGCATTCCA ATTGAACACT
ATGGTCGGTA ATGGCATGGG AGAAACCCAT TACTGGCTGG ACAGCGGGAG CGTTAAAAGC
TAA
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| Protein sequence | MLAELTDFKK QVKLIRDSGI QFLDFAFTLP ARKEYGEFLR QQGDGPVLRL VYNEREDKYH
IPAHDNEMPR SVESEYSLAI EDSLRLYQGV WVPLPYFRFN PPRAFSQGPA NWARVQFHEL
TEPDDKGNTW RATLIFDTKI FPDRENTQYL APSEDDVRSG AGFALAKHVH EMGDFLSQHW
VEEWLKDVYT TQARERLRQH YEDNEEKLVL KEHQAHYLNL LSVLGDTIHV PEVQVNDVKI
RDTAIPVDLV LDIGNSRSCG ILIEEHRDDN KGLSQLYQLQ LRDLSQPQYV YNEPFDSRLE
FAQAEFGKQD FSLKSGRSDA FTWPTIGRVG GEAFRMAAQR LGTEGSTGIS SPKRYLWDDQ
SYSPGWRFSQ AFVKSDREPL ATAAPLLYML NDQGKLLIRL PEDERMPVFS PIYSRSSLMT
MMLSEVLSQA LMQINSPAQR LKMNHASTPR RLRNVIMTVP PAMPKPERAI FEQSMHDAIR
LVWKSLGWEA MEYEGSDTQQ LKHPHPGVHV KWDEATCGQL VYLYNETQNY FGGRTDEFFS
ATRRPDNQMS GTEKRSLKVA SIDIGGGTTD LVISRYTLDE GQGINVRIIP KQLFREGFKV
AGDDILLDVI RLYLQPAVKA AMMNVGHSDV ASESIMSQLF GSESIEAGKQ VLRQQLTLQI
FAPLALAILH RYEEYQPDEG RELLSYTFRE LLEINVPTQK VQDYVNDAVR PGQDSGCVPF
SILDVPLEVD LSQLHNEFIN PRSGRMNICH SLRALCEVLW HYNCDILLLT GRPSRLPGIQ
ALIRQLQPVP PSRVLPLHGY ETGGWYPFNK KGCIDDPKST AVVGAMLCLL AENSRLNNFY
FRTANFVPYS TIRYLGMLDG NNIIKDSNVF YRDIDLDAEN FQLDQAQGFE SRGEVRIGFR
QLDNERWPAS ALYTLKITNP NLASELAGDA VMRLQLLAEQ GRPRNGEEAV SPERFRIESL
EMENARRNYG RKDVAFQLNT MVGNGMGETH YWLDSGSVKS
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