| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0469 |
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| Symbol | |
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| ID | 8528833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 503361 |
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| End bp | 506027 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Virulence effector, SrfC |
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| Protein accession | YP_003257913 |
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| Protein GI | 261819807 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TCAATTCTGA GCAGATTATT CAGGGCTGGC AAAATATTGA GGCTGGCGCA
GGACAGGCAA TTGACTGGAT CGCGACCGTT CGTGAGGACG CCCCGCATCT GGATAGAGAA
GCCGATCACC TCACCATTAA TCTACGTCGC AGCCGTAACA AAGCCCGCAG ATTAGCGCAG
GCAGCGGCGA AACCGATGAC GGTAGGCTTC TTTGGTTTAT CACAGGCTGG TAAATCGTAT
TTGATCTCCG CTCTCGCGGC AGGAGAAAAC GGTAATTTGG AGACACAACT TGCCGGTAAA
CAGCTTGATT TTCTGAAGCA CATCAACCCT CCCGGTGGAG GGAAAGAAGC CACTGGGTTA
GTCACTCGTT TCAGCCGACG CGGCGCGAGC CTCCGTGAGC ATCAACAGGT TTCGCTGCTA
CTCTTCAGTG AAGTGGAAAT GGGGAAAATC CTCGCTAATG CCTTTATTCA TGATTTTAAT
CAGGAAAAAT TTAACTGGCA GTACGATGAG AAGCGAACCC ATAACCTGCT AATGGCGCTG
GCGAAGCGCC GCAACGCTTC TCGAGTTCCG GGCGTCACAG AAGATGACGT GGTATCACTA
TGGGACTATC TCAGCCGTCA TGCAGGAAAG AGCCAGAGCC GTTTGGCATT GCACTATTGG
CCTCAGGCGA TTGCGCTGGC GCCTTGGCTA ACGCCGAAGG ATCGTGGGGT GCTTTTTTCT
GTTTTATGGG GTGACGTGCC GGAACTCACA GAAGCCTACA CCCAGTTTGC GCAGACGTTG
CAGCGCTTGG GTGGCGCACC GGAAGTCAGA GCTCCGTTAC ACACGCTGGT TCAGGAAAAG
GACGGCTTAT TGGTTCAGCA CGACAGCATT ATGAACGTTG ACATGCTGGA GCGTCTGAAT
AAAGAACCCG ATGTACGCAT TGACGTCACT CCGGTACAGG ATGGTCAGGC GGGTGCGTCC
GTTGAGATTT CTCTGGCCGA ATTGGCCGCT CTGACCGTTG AGTTGCACAT TCCACTGCTA
ACGCCCCCCC GTGAGCCTCT CTTTGAATCG GTAGATCTGC TCGACTTCCC TGGTTATCGA
GGTCGTCTGG GCGTTGAATC GATGGATGAC ATACGTCGGG AAGTGAAAAG TGAAGATAGC
AACCCGTTAG CGCAGTTAAT CCTTCGTGGA AAAGTCGCCT ATCTCTTTGA ACGATATACC
GAAAACCAGG AAATGAACGT ACTGGTTGTC TGCACGGCAT CAACTAAGCA ATCTGATGTA
AAAGAGGTTG GTGATGTACT GAATGAGTGG ATCAACTACA CCCAAGGCGC AGACACAGAG
GCACGCGGAC GGCGACTGCC CGGCTTAATC TGGGCGCTCA CCATGTTTGA TTTGCGCATC
AGCCAAGGAT TATCCCATGA CGAAGCCATT CTTCGTCAGT CCTGGGGCCT TGGCGGAATG
ATCAAAATGG CGATGACAGA ACGTTTTGGT AAATTTAAAT GGATGCAGGA GTGGCAGCAG
GGACAAGCAT TCAACAATAC CTTTCTGGTA CGTAAACCGG GTCAGATAAC CCCTTTTATC
CGTATAGAGA ACGAGAAAGA AGACGCCATC CGCGAAGAAA GCAAAGCGCA GTTGGCGCTG
ATGCGAAAAA CTTTCCTGGA AGATAGTGCC GTTACCCGTT ACATCGCCAC CCCGGACGCC
GCCTGGGACG CCATGCTCAG CTTGAATGAC GGTGGTATGC GCCGAATGGC CGATTACCTG
AGCCAGGTCG CCCGCCCGGA AGTAAAGCTG GAGCGTATTG CAGAACAGTT ACAGGATATG
CGCGGTGAAC TGGTAGAAGG TGGATTAGGA AAATGGTATC AGCCCGAAGG TGAAGAAGAA
GTTGCGAAAA AAAATCTCAT CGCTCAAGAG ATCCTCGCCG CACTGAAAAA ACGCAACGGC
ATGCATGGCG AACTGTTAGC GCGACTTGTG CCCACCCGGC GTTCCCTACA GGAACTCTAT
CTACAGCAAA TCTCGGTGGA ACCAGAGGAA GCGACTGAAG AAGAGGCCGA TTTTTTTGAT
ATCGGTGTTG ACGATGCCTT TGGTCTCGAT GCCCCAGTCG CCGCGACACA TAGCCATGAA
ACCGCCTTTG CCCGTCAGGC ATTGCAGCTT TGGATTAACC ATCTGCGTGA CCTACCAGAA
ACACAGGCAA TGCAGAACTA TATCAATCTG CCAAGACCGG TCATCGCGCT GCTGGTGGAT
GAACTGATCA CCGGTTTGTT ACGGTTGAAG CTAGAAGATG CGCTGGTTAG CGTAATGACC
AACACCGAGC AAGCGGGTGT CCGCCGCGAG CGAATGGTCG AACGTCAGGT ATCACGCGTA
CTGCACGTAA TGAGCAATTT TGTCACCTGG CTTGGTTATT TGACTGTCCC TGAGACAAAA
CGCCCCGTTC GCCCCAACAT GCAGGATCAA GCCATTTTCA CCCGCCCAGT GCAGTGCGGC
AGCGTACAGT GGATGGATGA CGAGCGTCTC ACACGCCTGA CCCCGCAACA GCTTAACTAC
AGCGCCATTT TTATTATCGA TTGGCTGATC GGCCTGGAAG CCTTGATCGC TGAGAATGCC
GGTCATTCCG CCGGACGGGA AATCAGCGTG GCGCAAAATG AAAAGCTCGG CGCAATCATT
CACCGTATTA AAACTGCACA GGAGTAA
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| Protein sequence | MSTINSEQII QGWQNIEAGA GQAIDWIATV REDAPHLDRE ADHLTINLRR SRNKARRLAQ
AAAKPMTVGF FGLSQAGKSY LISALAAGEN GNLETQLAGK QLDFLKHINP PGGGKEATGL
VTRFSRRGAS LREHQQVSLL LFSEVEMGKI LANAFIHDFN QEKFNWQYDE KRTHNLLMAL
AKRRNASRVP GVTEDDVVSL WDYLSRHAGK SQSRLALHYW PQAIALAPWL TPKDRGVLFS
VLWGDVPELT EAYTQFAQTL QRLGGAPEVR APLHTLVQEK DGLLVQHDSI MNVDMLERLN
KEPDVRIDVT PVQDGQAGAS VEISLAELAA LTVELHIPLL TPPREPLFES VDLLDFPGYR
GRLGVESMDD IRREVKSEDS NPLAQLILRG KVAYLFERYT ENQEMNVLVV CTASTKQSDV
KEVGDVLNEW INYTQGADTE ARGRRLPGLI WALTMFDLRI SQGLSHDEAI LRQSWGLGGM
IKMAMTERFG KFKWMQEWQQ GQAFNNTFLV RKPGQITPFI RIENEKEDAI REESKAQLAL
MRKTFLEDSA VTRYIATPDA AWDAMLSLND GGMRRMADYL SQVARPEVKL ERIAEQLQDM
RGELVEGGLG KWYQPEGEEE VAKKNLIAQE ILAALKKRNG MHGELLARLV PTRRSLQELY
LQQISVEPEE ATEEEADFFD IGVDDAFGLD APVAATHSHE TAFARQALQL WINHLRDLPE
TQAMQNYINL PRPVIALLVD ELITGLLRLK LEDALVSVMT NTEQAGVRRE RMVERQVSRV
LHVMSNFVTW LGYLTVPETK RPVRPNMQDQ AIFTRPVQCG SVQWMDDERL TRLTPQQLNY
SAIFIIDWLI GLEALIAENA GHSAGREISV AQNEKLGAII HRIKTAQE
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