| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0384 |
|---|
| Symbol | |
|---|
| ID | 8528747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 411431 |
|---|
| End bp | 412621 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | cystathionine beta-lyase |
|---|
| Protein accession | YP_003257834 |
|---|
| Protein GI | 261819728 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.782628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCA AAAAAACGGC AACCGCGTTA GTCGCCGCAG GACGCAGCAA GAAATTCACC
CACGGCTCCG TAAACCCCGT TATTCAACGC GCTTCTTCTC TGGTATTCGA TACCGTGCAG
GACAAGAAAC ATGCCACGAT TAACCGGGCC AACGGCGCGC TGTTCTACGG TCGCCGTGGC
ACGTTGACCC ATTTCTCGTT TCAGGAGGCG ATGGTGGAAC TGGAGGGTGG CGCTGGCTGT
GCGCTGTACC CTTGTGGAGC AGCAGCCATC TCTAACGCAA TCCTCTCTTT CGTTGCGGCA
GGCGATCATA TTCTGGTAAC GGAATCGGCC TACGAACCCA CGCAAGATTT CTGCACGAAA
GTACTCAGTA AGCTGAACGT CAGCACTACC TATTTCGATC CGCTCATTGG TGCCGGAATT
GCCGAGCTGA TCCAGCCGAA TACCAAAGTG GTCTTTCTTG AATCACCGGG CTCTATCACC
ATGGAAGTCC ACGATGTGCC GGCCATCGTC CAAGCCGTGC GCCGTATCAA TCCTGAGATC
GTTATCATGA TTGATAATAC CTGGGCTGCG GGCATCTTAT TCAAGGCATT CGACTTCGAT
ATTGACATCT CGATTCAGGC TGGTACGAAA TATATCGTCG GCCATTCCGA TGCTATGATC
GGCACAGCAG TCGCTAACGA ACGCTGCTGG GTACAGCTAC GTGAGCACTC TTACCTGATG
GGGCAAATGG TAGATGCAGA TACCGCTTAT GTCGCCAGCC GCGGCCTGCG TACATTGGGC
GTTAGGCTCA AACAGCATCA GGAAAGCAGC ATCCGCATCG CGAAGTGGCT GGCGGAACGG
CCAGAAGTGG CGGTCGTTAA CCACCCCGCG TTACCAGGAT GCAAAGGGCA TGAATTCTAC
AAGCGCGATT TTAACGGCTG CAACGGCTTG TTCTCCTTTG TGTTGAAGGA GAAATTAAGC
AAAGAAACGT TGGCACATTA TCTGGACCAT TTTGAGCATT TCAGTATGGC GTATTCCTGG
GGGGGCTTTG AGTCCCTGAT TCTGGCGAAT CAGCCAGAAG AACTTGCAGC CATTCGTCCT
GTGAGCGGCG TGGATTTTAC CGGTACACTT ATTCGGTTAC ATATTGGACT TGAAGACAGT
GACGATCTGA TCGACGATCT GACCGCAGGT TTCAGCAGAC TGAGCGCCTA A
|
|---|
| Protein sequence | MTSKKTATAL VAAGRSKKFT HGSVNPVIQR ASSLVFDTVQ DKKHATINRA NGALFYGRRG
TLTHFSFQEA MVELEGGAGC ALYPCGAAAI SNAILSFVAA GDHILVTESA YEPTQDFCTK
VLSKLNVSTT YFDPLIGAGI AELIQPNTKV VFLESPGSIT MEVHDVPAIV QAVRRINPEI
VIMIDNTWAA GILFKAFDFD IDISIQAGTK YIVGHSDAMI GTAVANERCW VQLREHSYLM
GQMVDADTAY VASRGLRTLG VRLKQHQESS IRIAKWLAER PEVAVVNHPA LPGCKGHEFY
KRDFNGCNGL FSFVLKEKLS KETLAHYLDH FEHFSMAYSW GGFESLILAN QPEELAAIRP
VSGVDFTGTL IRLHIGLEDS DDLIDDLTAG FSRLSA
|
|---|
| |