| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0335 |
|---|
| Symbol | |
|---|
| ID | 8528698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 369904 |
|---|
| End bp | 370383 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
|---|
| Protein accession | YP_003257795 |
|---|
| Protein GI | 261819689 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0694875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA ATAAAATATT GAATGCCAAC CGCGTAAAAT TAAATATGTC CGCGACTAAT
AAAGATGAAG CGATTAATGA ATTAGCCGAT CTGTTGTATG CCGATGGCGC CATTATCAAC
AAACAGGATT TTATTCACGA TGTCTGGTTA CGCGAAGCTG AAGGGTCGAC CGGTTTTGAA
AACCATATTG CGATCCCTCA TGGGAAATCA TCCGCCGTAA AACAAACCAC GCTCGCGATT
GGCCGTACCC GTCAGGATAT TCCCTGGGAA ACACTCGACG GTAGCCAGGT TCGCTGCATT
ATTCTCTTTG CCGTGCGTCT GGAAGATCAG AACACGACAC ACATTCGCCT GCTGTCTCAG
GTTGCCAGTG CACTGGCCGA TGATGAGGTG ATTGCTCAAC TGTTGGACGA ATCCGATCCC
CATAAAATTA TTCGGCTGTT TAGTCAGTAT GCAGAAACAG CGCCTGTCAC TCCGACATAA
|
|---|
| Protein sequence | MDINKILNAN RVKLNMSATN KDEAINELAD LLYADGAIIN KQDFIHDVWL REAEGSTGFE
NHIAIPHGKS SAVKQTTLAI GRTRQDIPWE TLDGSQVRCI ILFAVRLEDQ NTTHIRLLSQ
VASALADDEV IAQLLDESDP HKIIRLFSQY AETAPVTPT
|
|---|
| |