Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0328 |
Symbol | |
ID | 8528691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 362983 |
End bp | 364878 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_003257788 |
Protein GI | 261819682 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.934863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCAAT CAAGTTATAA CGCTGATGCG ATTGAAGTAC TCAGCGGGCT GGAACCGGTG CGCCGTCGTC CGGGAATGTA CACCGATACC ACGCGTCCTA ACCATTTGGG ACAAGAGGTC ATAGATAACA GCGTTGATGA AGCGCTGGCG GGTCATGCAC GCCGTATTGA TGTGATTTTG CACGCCGATC AGTCGCTGGA AGTGATTGAT GATGGCCGTG GGATGCCGGT AGATATCCAC CCAGAAGAGG GTGTCCCCGC TGTTGAGCTG ATCTTGTGTC GTCTGCATGC GGGTGGCAAA TTTTCCGGTA AGAATTACCA ATTTTCAGGG GGCTTGCACG GCGTAGGGAT TTCCGTGGTG AACGCTCTGT CTACCCGTGT TGAAGTCACC GTGCGTCGTG ACGGTCAGGT CTATGACATC GCCTTCGAAA ACGGCGATAA AGTGCAGGAA CTCACTGTAA CCGGCACCTG TGGACGTCGT AATACCGGGA CTCGCGTGCA TTTCTGGCCG GATGAGACAT TCTTCGACAG CGCACGTTTT TCTGTCTCTC GTTTGACGCA TCTGCTGAAG GCCAAAGCGG TCTTATGCCC CGGTGTAGAA ATCGTCTTCA AAGACAAAGT GAACAACACT GAGCAGCGCT GGTGCTATCA GGATGGCCTG AATGACTACC TGTGTGAGGC GATAAATGGC CTGATCACGC TGCCAGAAAA ACCGTTTTTG GGCTCGATCA CCGGCGAAAC TGAAGCCGTA GACTGGGCTC TGCTCTGGCT GCCGGAAGGC GGTGACCTGC TGACGGAAAG CTACGTTAAC CTTATTCCTA CACCGATGGG GGGGACGCAC GTTAACGGCC TGCGTCAAGG GTTGCTGGAT GCGATGCGTG AATTCTGCGA ATTCCGTAAT ATTCTACCGC GCGGCGTGAA GCTAAGCGCA GATGATATCT GGGAACGCTG TGCCTATGTG CTGTCGGTAA AAATGCAGGA ACCACAGTTT GCCGGGCAGA CCAAAGAACG TCTGTCTTCA CGGCAGTGCG CTGCGTTTGT ATCCGGTGTT GTGAAAGACG CGTTCAGCCT GTGGCTGAAT CAGAATGTGC AGGCTGCGGA ACAACTGGCG GAGCTGGCAA TTTCCAGCGC TCAGCGCCGT ATGCGCGCCG CCAAAAAAGT GGTGCGTAAA AAACTGACCA GCGGACCGGC GTTGCCTGGC AAACTGGCGG ATTGTACCTC GCAGGATCTG AGTCGGACGG AACTGTTTCT GGTGGAAGGG GATTCGGCGG GCGGATCGGC GAAGCAAGCG CGCGAACGTG AATTCCAGGC GATCATGCCG CTGAAAGGTA AGATCCTGAA TACTTGGGAA GTCTCGTCCG ATGAAGTGCT GGCTTCGCAG GAAGTGCATG ATATTTCGGT GGCTATCGGT ATCGATCCCG ATAGCACCGA TCTCAGCCAA CTGCGTTACG GCAAGATCTG TATTTTGGCG GATGCGGATT CCGATGGCTT GCACATCGCA ACGCTGCTGT GTGCGCTGTT TGTCCGTCAT TTCCGTGCGC TGGTTCAAGG TGGGCACGTT TATGTCGCGA TGCCGCCGTT GTACCGTATC GATCTGGGCA AAGAGGTTTA CTACGCGCTG GACGAAGAGG AAAAAGCGGG CGTGCTGGAA CAGCTTAAGC GCAAGAGAGG CAAGCCGAAC GTACAGCGAT TTAAAGGTCT GGGTGAAATG AACCCGCCAC AACTGCGCGA AACCACGCTG GATCCCAATA CCCGCCGTCT GGTGCAACTG ACTATCAACG ACGAGGAGAT GGAGCAGACG ATGGCGATGA TGGATATGCT GCTGGCGAAG AAACGCTCGG AAGATCGCCG CAACTGGCTG CAAGAGAAAG GCGATAAGGT GGAGCTCGAA GTATAA
|
Protein sequence | MAQSSYNADA IEVLSGLEPV RRRPGMYTDT TRPNHLGQEV IDNSVDEALA GHARRIDVIL HADQSLEVID DGRGMPVDIH PEEGVPAVEL ILCRLHAGGK FSGKNYQFSG GLHGVGISVV NALSTRVEVT VRRDGQVYDI AFENGDKVQE LTVTGTCGRR NTGTRVHFWP DETFFDSARF SVSRLTHLLK AKAVLCPGVE IVFKDKVNNT EQRWCYQDGL NDYLCEAING LITLPEKPFL GSITGETEAV DWALLWLPEG GDLLTESYVN LIPTPMGGTH VNGLRQGLLD AMREFCEFRN ILPRGVKLSA DDIWERCAYV LSVKMQEPQF AGQTKERLSS RQCAAFVSGV VKDAFSLWLN QNVQAAEQLA ELAISSAQRR MRAAKKVVRK KLTSGPALPG KLADCTSQDL SRTELFLVEG DSAGGSAKQA REREFQAIMP LKGKILNTWE VSSDEVLASQ EVHDISVAIG IDPDSTDLSQ LRYGKICILA DADSDGLHIA TLLCALFVRH FRALVQGGHV YVAMPPLYRI DLGKEVYYAL DEEEKAGVLE QLKRKRGKPN VQRFKGLGEM NPPQLRETTL DPNTRRLVQL TINDEEMEQT MAMMDMLLAK KRSEDRRNWL QEKGDKVELE V
|
| |