Gene Pecwa_0234 details

Gene Information

• Locus tag: Pecwa_0234
• ID: 8528596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 267714
• End bp: 268379
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 52%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003257696
• Protein GI: 261819590

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCCTT GGCTACAACT CATGGCAGAC TCTTTCTGGA GTCTGCTGTC TGCGGGACTG 
AAATTTACCG TCCCTCTGGC TATCCTGTCT TTCATCTTTG GCTTAGCTCT CGGCATTCTC 
ATCGCGCTGG TCCGCCTCTA TGGCCCAAAG CCACTGAAAT GGCTGGGTGA TTTCTACGTT 
TGGGTCATTC GTGGAACGCC GTTGCTGGTG CAGCTTTTCC TGATTTTTTA TGGGCTGCCC 
AGTGCAGGCA TTACCCTAGA TGCCTTCCCT GCTGCGCTGA TTGGTTTCAC CGTCAGTGTG 
GGAGCCTATA GTTCGGAGAT CGTCCGTGGG GCAATTTTAT CTGTCCCGAA AGGCCAGTGG 
AGTGCCGCCT ATTCTCTCGG CATGAATGGC AGGCAGGCGA TTCGTTGGGT CATCTTCCCC 
CAATCCGTTT TCGTTTCGCT GCCGCCGCTC TCCAATACGT TTATTTCTTT AATCAAGGAT 
ACGTCACTGG CCGCCGTCAT CACCGTACCA GAGATGTTTT TATCCGCTCA GCGCATCGTT 
TCCGTTACCT ATGAACCTCT GATTCTGTAT GTCGAGGCTG CGCTGATTTA TCTGATGTTC 
AGCACGGTGC TAAGCCAATT ACAGGTTAAG CTCGAAAAGT ATTATCAGCG CCACATCACA 
CACTAA 

 

Protein sequence

MPPWLQLMAD SFWSLLSAGL KFTVPLAILS FIFGLALGIL IALVRLYGPK PLKWLGDFYV 
WVIRGTPLLV QLFLIFYGLP SAGITLDAFP AALIGFTVSV GAYSSEIVRG AILSVPKGQW 
SAAYSLGMNG RQAIRWVIFP QSVFVSLPPL SNTFISLIKD TSLAAVITVP EMFLSAQRIV 
SVTYEPLILY VEAALIYLMF STVLSQLQVK LEKYYQRHIT H