Gene Pecwa_0227 details

Gene Information

• Locus tag: Pecwa_0227
• ID: 8528585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 253419
• End bp: 254102
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 54%
• Product: protein of unknown function DUF1481
• Protein accession: YP_003257689
• Protein GI: 261819583

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.143449
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGTTA AAGGTTTAAG CAGAGGGGCG TTTTCGCCCC TTTTGCTTTT ACGACGTTTA 
TGTGGCGCAG GCCTCGTACT TATTTCAGTG GTAGCCTGCA GTAGCCGCAC TGCACCGCCG 
GATGTTTTCT CCAGCGGTTA CGTTGCCGAT CGTGGTATCG TGCGTATCTG GCGTAAGGAT 
GATGCGCAGA ATACGACGGC GCTGACCACC GTGTATAACC CGCTTCAGGG CAATGCTCTC 
GTGGTGACTC GCTATACATT CCTGCAGGAT AAACTACGCG AAATACAGCG TAATCAGCTC 
GGTGCGCAAC AAGAAGATAT GCGCTTACGC TTTGCTGAAG ATGGAACCGT CAGCTTTATG 
CAGCGGCAGC TTGCCGAAAG ACGTGAATCG GTTTCCGATG ATGATGTCGC GCTCTACCAG 
TTTGATGCTA AGCGCATGCT GGAATTGAGC GATGTCCTGC GTGCAGGCAA GGTGGTGTTA 
AAGCAAGGGA AATGGCTGGA AGGGCCGGTG CAGTCTTGTG ACGGCACGGT GGTTCGCCCT 
GACTTTGACA ACGACTCGCG TGAATGGATC GCGCAGCAAA AAACGCATGC CACACGTCCG 
CTAAACGTGG CGTGGCTGGA AGCACCAGAA GGAACGCAGC TATTGCTAGT AGTGGAAGAT 
GACGTCTGCC AGTGGCAGCC ATAG 

 

Protein sequence

MPVKGLSRGA FSPLLLLRRL CGAGLVLISV VACSSRTAPP DVFSSGYVAD RGIVRIWRKD 
DAQNTTALTT VYNPLQGNAL VVTRYTFLQD KLREIQRNQL GAQQEDMRLR FAEDGTVSFM 
QRQLAERRES VSDDDVALYQ FDAKRMLELS DVLRAGKVVL KQGKWLEGPV QSCDGTVVRP 
DFDNDSREWI AQQKTHATRP LNVAWLEAPE GTQLLLVVED DVCQWQP