| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0111 |
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| Symbol | |
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| ID | 8528461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 131040 |
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| End bp | 132314 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_003257586 |
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| Protein GI | 261819480 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGC TAGGTGTGAT TGCCGACGAT TTTACCGGTG CCACAGATAT CGCCAGCTTT
CTGGTCAACA ACGGGCTGCC GACAGTGCAA CTCAACGGTG TACCGCCGTC CGATTTTAAG
GTCGACACGC AGGCCGTGGT GATTAGCCTG AAGTCACGAT CTTGCCCGGC AGAACAGGCC
GTGGCGGATT CACTTAAGGC ACTGGCGTGG CTACAACAAC AGGGTTGCCA GCAGTTCTAC
TTTAAATATT GTTCCACCTT CGACAGCACC GCGAAAGGCA ATATCGGTCC GGTGACCGAC
GCACTGTTAG ATCAGCTTGG CGAAACGCAA ACCATCATCT CTCCAGCGCT GCCGGTGAAC
GGAAGAACCG TTTATCAGGG GCATTTATTC GTGATGGATC AATTGCTGTC CGAGTCTGGA
ATGCGCCACC ATCCGGTCAC GCCAATGACA GACAGCAACC TGATGCGCGT GATGGAGCAG
CAGGCAACCG GGCGCTGTGG ACTGGTGCCG TATGCCGTGA TGGATCAGGG TGCAGAGGCC
GTCAAACAGC GGCTGGCGCA GTTGAAAGAA CAGGGTATGC GCTATGTGGT GCTGGATACG
CTGAACGAGC AGCACCTGCT GACGCAGGGC GAGGCGCTGC GCGACATGAA GCTGGTCACC
GGCGGCTCCG GTCTGGCGAT TGGTCTGGCA CGCCAGTGGG CGGAGTGCGC GACACAAACC
GGTTCCGCCA CCGAGGCGGG GAAACCACAA TCCGGTGCAG GCGTTGTGCT ATCCGGCTCC
TGCTCAGTGA TGACCAACAA GCAGGTCGCT CACTACCTGA AACAGGCGGC GGGTCGTGAC
ATTGACGTCG CCCGCTGCTT AGCAAGCGAT GACGCTCAGG CAGCCTATGT GCAGGAGCTG
GCTGACTGGG TAAAAGCACA TCGTGACGAC GCGCTCGCGC CGTTGCTGTA CGCCACCTCG
TCACCCAACG AACTGGCGCA GATTCAGCAG CGCTGGGGGG CGGAAGCCAG TAGCCAGGCA
GTAGAGCAAC TGTTTGCCGC TGTCGCCCAT CAGCTTCAGC AGGATGGCTT TCAGCGTTTC
ATTATCGCGG GTGGGGAAAC CTCCAGCATC GTGGTGCAAA CGCTGGGTAT TCACGCGTTC
CATATCGGGC CGTCTATTTC CCCCGGCGTA CCGTGGGTCC GTTCCACCAA TCATCCGCTG
TCGCTGGCGT TGAAATCTGG CAATTTCGGT GATGAAGACT TTTTTGCCCG CGCCCAAAAG
GAGTTTGCCG CATGA
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| Protein sequence | MIKLGVIADD FTGATDIASF LVNNGLPTVQ LNGVPPSDFK VDTQAVVISL KSRSCPAEQA
VADSLKALAW LQQQGCQQFY FKYCSTFDST AKGNIGPVTD ALLDQLGETQ TIISPALPVN
GRTVYQGHLF VMDQLLSESG MRHHPVTPMT DSNLMRVMEQ QATGRCGLVP YAVMDQGAEA
VKQRLAQLKE QGMRYVVLDT LNEQHLLTQG EALRDMKLVT GGSGLAIGLA RQWAECATQT
GSATEAGKPQ SGAGVVLSGS CSVMTNKQVA HYLKQAAGRD IDVARCLASD DAQAAYVQEL
ADWVKAHRDD ALAPLLYATS SPNELAQIQQ RWGAEASSQA VEQLFAAVAH QLQQDGFQRF
IIAGGETSSI VVQTLGIHAF HIGPSISPGV PWVRSTNHPL SLALKSGNFG DEDFFARAQK
EFAA
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