Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0004 |
Symbol | gyrB |
ID | 8528354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 3707 |
End bp | 6124 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | DNA gyrase subunit B |
Protein accession | YP_003257480 |
Protein GI | 261819374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATT CTTATGACTC CTCAAGTATC AAGGTATTGA AAGGGCTGGA TGCGGTTCGT AAACGCCCAG GTATGTATAT CGGCGATACG GACGACGGTA CCGGCCTGCA TCACATGGTA TTCGAGGTTG TGGACAACGC TATCGACGAA GCACTCGCTG GCTATTGTAA AGACATTATC ATCACCATCC ATGCCGATAA CTCGGTATCG GTGCAGGATG ATGGCCGTGG TATTCCGACC GGCATTCATG AAGAAGAAGG GATCTCCGCT GCTGAAGTCA TCATGACTGT GCTGCATGCG GGCGGTAAGT TCGATGATAA CTCGTATAAA GTCTCCGGCG GCCTGCACGG CGTAGGGGTT TCCGTGGTTA ACGCCCTGTC GGAAAAACTG AAGCTGGTTA TCCACCGCGA CGGAAAACTT CACGAACAAA TCTACAAACA CGGTGTAGCG CAGGCTCCGC TGGCGGTCAC CGGCGAGACC AACAGAACCG GCACCACGGT GCGCTTCTGG CCGAGCCACG AGACGTTCAC CAATGTGGTT GAATTCGAGT ATGAAATTCT GGCTAAGCGT CTGCGCGAGC TGTCGTTCCT GAACTCTGGC GTCTCTATTC GCCTGATCGA TGAGCGTGAG AAAGATAAAG CCGATCATTA CCATTATGAT GGCGGTATCA AGGCATTCGT TGATTACCTG AACCGTAACA AGACGCCAAT CCACCCGAAT GTGTTCTATT TCTCAACGGT GAAAGATGAC ATCGGTGTTG AAGTGGCATT GCAGTGGAAC GATGGTTTCC AGGAAAACAT CTACTGCTTT ACCAACAACA TTCCGCAGCG TGACGGTGGT ACACACTTGG CCGGCTTCCG TGCCGCGATG ACTCGTACCC TGAATACCTA CATGGATAAA GAAGGCTACA GCAAAAAAGC CAAAGTCAGC GCTACCGGTG ACGATGCGCG TGAAGGGCTG ATTGCTGTGG TTTCAGTGAA AGTTCCCGAT CCGAAGTTCT CCTCGCAGAC CAAAGACAAG CTGGTTTCTT CCGAAGTGAA AACCGCGGTT GAATCGCTGA TGAACGAGAA GCTGGTGGAT TATCTGATGG AGAACCCGTC AGACGCCAAA ATCGTGGTCG GAAAAATTAT TGATGCTGCA CGTGCTCGTG AAGCGGCGCG TAAAGCACGT GACATGACGC GTCGTAAAGG TGCGCTCGAT CTGGCTGGTT TGCCGGGTAA ACTGGCGGAC TGTCAGGAAC GCGACCCGGC GCTGTCTGAA CTGTACCTGG TGGAAGGGGA CTCCGCGGGT GGCTCTGCTA AGCAGGGGCG TAACCGTAAG AATCAGGCGA TCCTGCCGCT GAAGGGTAAA ATCCTGAACG TTGAGAAGGC GCGCTTTGAC AAAATGCTTT CCTCGCAGGA AGTGGCGACG CTGATCACTG CGCTGGGCTG CGGCATTGGC CGTGATGAGT ACAACCCAGA CAAACTGCGC TACCACAGCA TCATCATCAT GACCGATGCT GACGTCGATG GCTCGCACAT CCGTACTCTG CTATTGACCT TCTTCTATCG TCAACTGCCT GAAATTGTTG AGCGTGGCCA CGTTTATATC GCGCAGCCAC CGCTGTACAA GGTGAAAAAA GGCAAGCAGG AACAGTACAT CAAAGATGAC GAAGCGATGG ATCAGTACCA GATTATGCTG GCACTGGACG GCGCGACGTT GCATACCAAT GCACAGGCAC CTGCGTTGGC GGGTGAACCG CTGGAGAAAC TGGTTTCTGA ACACTATGCG GTACAGAAGC TGATTGGTCG TATGGAGCGC CGCTTCCCGC GTGCGTTTTT AAATCGTCTG ATCTATCAGC CTACGCTGCT CGAAGCTGAT TTGAGTGAGC GTGAAAACGT GCAGGCGTGG GCGGAATCGC TGGTTAGCGG CTTGAACGCC AACGAAGTGC ACGGCAGCAC CTACAGTTTT GTGATTCACC ACGATGAAGA GCGCGGCGTG TTTGAACCGG CACTGCGCGT GCGAACACAC GGTGTGGATA CCGATTATCC GCTGGGCGCG GGCTTTGTGG CGGGTGGTGA ATATCGCAAG CTGAATCAAC TGGGTGAAAA ACTGCGCGGC CTGATTGAAG AAAATGCGTA CATCGAACGT GGCGAGCGTC GTCAGCCAGT GGCTAGCTTT GAACAGGCGC TGGAATGGCT GGTGAAAGAG TCCCGCCGTG GTCTAAGCGT GCAGCGTTAT AAAGGGCTGG GTGAAATGAA CCCTGACCAA CTGTGGGAAA CCACGATGGA TCCAACCAGT CGCCGCATGC TGCGCGTGAC GGTGAAAGAC GCCATTGCTG CCGATGAGCT GTTTACAACG CTGATGGGGG ATGCCGTTGA ACCGCGTCGT GCGTTTATCG AAGAGAACGC CCTGAAGGCG ATGAACATCG ATATCTGA
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Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGYCKDII ITIHADNSVS VQDDGRGIPT GIHEEEGISA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV SVVNALSEKL KLVIHRDGKL HEQIYKHGVA QAPLAVTGET NRTGTTVRFW PSHETFTNVV EFEYEILAKR LRELSFLNSG VSIRLIDERE KDKADHYHYD GGIKAFVDYL NRNKTPIHPN VFYFSTVKDD IGVEVALQWN DGFQENIYCF TNNIPQRDGG THLAGFRAAM TRTLNTYMDK EGYSKKAKVS ATGDDAREGL IAVVSVKVPD PKFSSQTKDK LVSSEVKTAV ESLMNEKLVD YLMENPSDAK IVVGKIIDAA RAREAARKAR DMTRRKGALD LAGLPGKLAD CQERDPALSE LYLVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG RDEYNPDKLR YHSIIIMTDA DVDGSHIRTL LLTFFYRQLP EIVERGHVYI AQPPLYKVKK GKQEQYIKDD EAMDQYQIML ALDGATLHTN AQAPALAGEP LEKLVSEHYA VQKLIGRMER RFPRAFLNRL IYQPTLLEAD LSERENVQAW AESLVSGLNA NEVHGSTYSF VIHHDEERGV FEPALRVRTH GVDTDYPLGA GFVAGGEYRK LNQLGEKLRG LIEENAYIER GERRQPVASF EQALEWLVKE SRRGLSVQRY KGLGEMNPDQ LWETTMDPTS RRMLRVTVKD AIAADELFTT LMGDAVEPRR AFIEENALKA MNIDI
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