| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5103 |
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| Symbol | |
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| ID | 4583664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 616216 |
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| End bp | 618018 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639772406 |
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| Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
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| Protein accession | YP_918859 |
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| Protein GI | 119387825 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.109618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.785787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC CGACCAGCGC ACCGAAGCCC GCTGTCGCAT CCGCCGAGTT GCCGCCCGTG
CCCTGCCCCG AACCCTTGGG CAGAGAGGCG TTCCGCACCT TCGACCGCAT GCGCGAGGCG
ATGACGGCCC AGTTCACCGG CGGGCTGTCG CCGGCGGCGC TGACGCTGGC CTTGCAGGAT
TGGACCATGC ATCTGGCCGC CGCGCCGGGC AAGCGGATGG AGCTGCTCGA CAAGGCCAAC
CGCAAGGCCG CGCGGCTGTT GTGCCACCTG GCCGCGCTTT GCGTGAATCG CGAGGCGCCG
GCCTGCATCG ACCCGCTGCC CGGCGACTAT CGCTTTGCCG CCGAGGGCTG GAAGAAGCCG
CCCTTCAGCA TATGGGCGCA GGCCTTCCTG CTGCAACAGC AATGGTGGCA CAACGCCACG
CACGAAGTGC CGGGGATGAA CCCGCATCAC CAGGAGATCG TCTCGTTCAC CGCGCGGCAG
ATCCTGGACG TGTTCTCGCC ATCGAACCTG CCCTTCACCA ACCCCGAGGT GATCGCCCGC
ACCATGGAAA CCGGCGGCAT GAACCTGGTG CAAGGCATGC GCAACTGGAC CGAGGACATG
ATCCGCCAGG CGACCGGCCA GCCCCCGGTC GGAACCGAGG ATTTCGTGGT CGGCAAGGAC
GTGGCGGTGA CGCCGGGCAA GGTCGTCTAC CGCAACCACC TGATAGAGCT GATCCAATAC
GCCCCCGCCA CCAGGACGGT CATGGCCGAG CCGATCCTGA TCGTGCCGGC CTGGATCATG
AAATACTACA TCCTGGACCT CTCGCCGCAG AACTCGCTGA TCCGGCATCT GGTGGCGCAG
GGCCATACGG TCTTCTGCAT CTCCTGGCGC AATCCCACGG CCGAGGATCG CGACCTGACG
CTGGACGACT ATCGCCGGCG CGGGGTGATG GCGGCGCTGG AGGCGATCAA CGCCATCCTG
CCGCAGCGCA AGGTCCATGC CGTGGGCTAT TGCCTGGGCG GCACGCTGCT GTCCATCGCC
GCCGCCGACA TGGCGCATGG CGACGACGAC CGGCTGGCCA GCCTGACCTT GCTGGCGGCG
CAGACCGATT TCAGCGAACC GGGGGAACTG GCGCTGTTCA TCGACCACAG CCAGGTGAAC
CTTCTGGAAA GCATGATGTG GAACCGGGGC TACCTGTCCG CCGACCAGAT GGCCGGGGCC
TTCCAGCTTT TGCGCTCGAA CGACCTGATC TGGTCGCGCA TGGTGCATGA CTATCTGATG
GGCGAGCGGC GGCCGATGAT CGACCTGATG GCCTGGAACG CCGATTCGAC GCGCATGCCC
TACCGGATGC ATGCGGAATA CCTGGAGCGG CTTTACCTGG ACAACGAACT GGCCGCCGGG
CGCTTCATGG TCGAGGGGCG GCCCGCCGCG ATCCAGAACA TCCGCGTGCC GATGTTCGTC
GTCGGCACAG AACGCGACCA TGTTGCGCCC TGGCGCTCGG TCTTCAAGAT CCATTACCTC
AGCAATACCG AACTGACCTT CGTGCTGACC AGCGGCGGCC ACAATGCCGG CATCGTCAGC
GAGCCGGGCC GGCCGCACCG GCGCTATCGC ATCGCGCTGC GCGAGGCCGG CGGGCGCTGC
CCCGGCCCCG ACATCTGGGC CGAGACCGCC GAGGCACGGC CGGGATCGTG GTGGGACGCC
TGGACCAAAT GGCTGGCCGC GCATTCCTCG GCCAAGCGCA CCCCGCCGCC GGCCATGGGC
GCGCGCAAGG CCGGCCATGC GCCGCTGGCC GACGCGCCCG GCACCTATGT GCTGCAACGC
TAG
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| Protein sequence | MKTPTSAPKP AVASAELPPV PCPEPLGREA FRTFDRMREA MTAQFTGGLS PAALTLALQD
WTMHLAAAPG KRMELLDKAN RKAARLLCHL AALCVNREAP ACIDPLPGDY RFAAEGWKKP
PFSIWAQAFL LQQQWWHNAT HEVPGMNPHH QEIVSFTARQ ILDVFSPSNL PFTNPEVIAR
TMETGGMNLV QGMRNWTEDM IRQATGQPPV GTEDFVVGKD VAVTPGKVVY RNHLIELIQY
APATRTVMAE PILIVPAWIM KYYILDLSPQ NSLIRHLVAQ GHTVFCISWR NPTAEDRDLT
LDDYRRRGVM AALEAINAIL PQRKVHAVGY CLGGTLLSIA AADMAHGDDD RLASLTLLAA
QTDFSEPGEL ALFIDHSQVN LLESMMWNRG YLSADQMAGA FQLLRSNDLI WSRMVHDYLM
GERRPMIDLM AWNADSTRMP YRMHAEYLER LYLDNELAAG RFMVEGRPAA IQNIRVPMFV
VGTERDHVAP WRSVFKIHYL SNTELTFVLT SGGHNAGIVS EPGRPHRRYR IALREAGGRC
PGPDIWAETA EARPGSWWDA WTKWLAAHSS AKRTPPPAMG ARKAGHAPLA DAPGTYVLQR
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