| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5097 |
|---|
| Symbol | |
|---|
| ID | 4583658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 609793 |
|---|
| End bp | 610785 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639772400 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_918853 |
|---|
| Protein GI | 119387819 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.282354 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.971195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGAGA CATTGAACCG CGATACGGCG ATCAACCTGG CGATCCTTGC CCTGCTGGTC
GCCACCGCCA TCGGTGCGCA TCTGGCCGGC AACGGCTTTA CGGTGACGCT GGCGACCAAG
GCCGCGATCT TCGGCCTTGC CGGGGTGGGG CTGAACCTGG CGCTGGGCTA TGGCGGGCTG
ATCTCGTTCG GCCATGCCGC CTTTTTCGGC ATCGGCGGCT ACGTCACCGG GATCCTTGCC
AGCCATGCCA GCACCGGCAT GCCGGTCACC AGCCTGCCCT TTACCATCAT GGGCAGCAAC
GAGATGCTGG GCATCTGGCC GATGGCGATG CTGGCGGCGG GGCTGGCCGC GCTGGTCATC
GGGGCGCTCA GCCTGCGCAC CTCGGGCGTC TATTTCATCA TGGTGACGCT GGCCTTCGCG
CAGATGCTTT ACTATTTCGC CATGAGCTGG CCGCGCTATG GCGGCGAGGA CGGGCTGAGC
TTCTATGTCC GCAACACCTT TCCCGGCCTG AACACCTTTG CCCCGATCCA GTATTTCGCC
ATCTGCGCCA CGCTGCTGGC CGTCGCGCTG GTCTTTACCG CCGTGGTCAC GCAGTCGCGT
TTCGGCCTGG CCTTGCAGGC GGCGCGGCAA AACAGCCAGC GCACGGTCGC CGTCGGCATC
CGGCCCTATG CGATCCGGCT GACGGCCTTT GTCCTGTCGG GCATGATCGT CGGGCTGGCG
GGGTCGCTTT ACGCCGACCT CAACCGTTTC GTCAGCCCGG CCATGATGTC CTGGCACATG
TCGGGCGAAA TCATGGTCTT CGTCATCCTG GGGGGTGTGG GGCGGCTTTG CGGCCCGGTC
GCCGGCGCCG CGCTTTTCAT CCTGCTGGAG CATGTCCTGG GCGGCATCAG CGAATACTGG
CAGGCGCTGC TGGGCCTTCT GCTGCTGGCC ATCGTGCTGT TCGCGCCGGG CGGGCTGATC
GGCATCGTCA CGCGGAGGGG CCGCCATGCC TGA
|
|---|
| Protein sequence | MRETLNRDTA INLAILALLV ATAIGAHLAG NGFTVTLATK AAIFGLAGVG LNLALGYGGL
ISFGHAAFFG IGGYVTGILA SHASTGMPVT SLPFTIMGSN EMLGIWPMAM LAAGLAALVI
GALSLRTSGV YFIMVTLAFA QMLYYFAMSW PRYGGEDGLS FYVRNTFPGL NTFAPIQYFA
ICATLLAVAL VFTAVVTQSR FGLALQAARQ NSQRTVAVGI RPYAIRLTAF VLSGMIVGLA
GSLYADLNRF VSPAMMSWHM SGEIMVFVIL GGVGRLCGPV AGAALFILLE HVLGGISEYW
QALLGLLLLA IVLFAPGGLI GIVTRRGRHA
|
|---|
| |