Gene Pden_5092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5092 
Symbol 
ID4583653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp605058 
End bp605477 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID639772395 
Productthioesterase superfamily protein 
Protein accessionYP_918848 
Protein GI119387814 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.144651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC TGCGTCGCAT CCAGGTCGAG TTCAACCATT GCGACCCGGC GGGGATCGTC 
TTTTACCCCC GCTATTTCGA GATGCTGAAC TCGGTGATCG AGAACTTCTT CGCCGAGGTG
CTGGCCTATC CCTTCACCCG CATCCACATC GAGGAGGATT GCGCCGTCCC GACCGTGCAG
ATCGAGGCCG GCTTCCAGGC CCCCTCGCGT CTGGGCGAGG TGCTGGAATT CACGCTGGAG
CTCCAGCATG TCGGCCGCTC CAGCGCGCGG CTGGTGCAGC GGGCCAGTGC CGGCGGGCAG
GTCAGGCTGC AATGCGTCTC GACCCTGGTC TGGGTCACGC CGGACGGGCG CGCCGCACCC
TGGCCCGAGG TGATCCGCCG CAAGATGATC GCATTCATGG AGGCAAGCGA TGGTGCATGA
 
Protein sequence
MSYLRRIQVE FNHCDPAGIV FYPRYFEMLN SVIENFFAEV LAYPFTRIHI EEDCAVPTVQ 
IEAGFQAPSR LGEVLEFTLE LQHVGRSSAR LVQRASAGGQ VRLQCVSTLV WVTPDGRAAP
WPEVIRRKMI AFMEASDGA