| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_5088 |
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| Symbol | |
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| ID | 4583649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 601941 |
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| End bp | 602678 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639772391 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_918844 |
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| Protein GI | 119387810 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.242279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG CGGGCAAGCG GGTGCTGATC ACCGGGGGCG GCACGGGCGT CGGCGCCGAT
CTGGCGCGCG CCTTTGCCCG GGCCGGGGCC GAGGTGGTGA TCTGCGGCCG CCGCAAGGCG
CCGCTGGAGG CCGTGGCCGA ACAGACCGGC GCCCGCGCCC TGACCGCCGA CGTGACCAGT
GAGCCCAGCG TCAAGGCGAT GTTCGCCGAT GCCGGCCCCT GCGATATCGT CATCGCCAAC
GCCGGCGCTG CGGAAAGTGC GCCCTTGGGC CGCACCACGC TGGAGCAGTG GAACGCCATG
CTGGCGGTGA ACCTGACCGG CACCTTCCTG ACCTTTCGCG AGGGGCTGGC GCAATTGCCC
GGCTGGGGCC GGCTGATCGC CGTGGCCTCG ACCGCCGGCC TTCGCGGCTA TGCCTACGTC
GCGCCCTATG CGGCGGCCAA GCATGGCGTG GTCGGGCTGG TCCGCAGCCT GGCGCTGGAG
GTGGCGCGGC GGCCGGTGAC GGTCAACGCG CTGTGCCCCG GCTTCCTGGA CACCGAGATG
ACGGCGCGTT CCATCGCCAC CATCATGGAC AAGACCGGCA AGAGCCGGGA GCAGGCGCTG
GCCGCGCTGA CCGCGACCAA TCCGCAGGGC CGGCTGATCC AGCCCGCCGA GGTCAGTGCC
GCGGCGCTGT GGCTGTGCGG TCCGGGCTCC GAGGGGATCA ACGGCCAGGC CATCGCCATC
GCGGGGGGCG AGGCATGA
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| Protein sequence | MTIAGKRVLI TGGGTGVGAD LARAFARAGA EVVICGRRKA PLEAVAEQTG ARALTADVTS
EPSVKAMFAD AGPCDIVIAN AGAAESAPLG RTTLEQWNAM LAVNLTGTFL TFREGLAQLP
GWGRLIAVAS TAGLRGYAYV APYAAAKHGV VGLVRSLALE VARRPVTVNA LCPGFLDTEM
TARSIATIMD KTGKSREQAL AALTATNPQG RLIQPAEVSA AALWLCGPGS EGINGQAIAI
AGGEA
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