Gene Pden_5074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_5074 
Symbol 
ID4583635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp587412 
End bp588389 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID639772377 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_918830 
Protein GI119387796 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.224202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.725204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCGAGGCCCG GCGGCGGCCC ATCCTGCGGA TGATCGCGGG CCGGCTGGGC 
ATCGGGGTAT TCACGCTGTT CGTCATCTCG GTGCTGATCT TCCTGGCCGT CAGCCTGTTG
CCCGGCGACA TCGCCCAGCA GGTGCTGGGC CAGTCCGCCA CGCCCGAGAC CGTCGCGGCC
TTCCGGCGCG AGCTTGGCCT CGACCAACCC CTGGCCTGGC GCTATCTCGA CTGGGTCGGT
GGCGTGCTTA GCGGCGATTT CGGCCGCTCG CTGGCCAACG GCCGGCCGGT GGCGGACCTG
CTGGCCGCGC GGCTGGGCAA CACCCTGTTC CTGGCCGCCT ATGCCGCGGT GATCGCGGTG
CCGCTGGCGG TGGGGCTGGG CCTGCTCGCC GCCCTGTGGC GCGGCAGCTG GTTCGACCGC
ATCGCCAATG TGGCGACGCT GTCGGCGATC TCGTTTCCCG AATTCTTCAT CGCCTACATC
CTGATGTTCT GGCTGTCGGT CAGGATGGGC TGGTTCCCCT CGATCGCCGA TCCCGGCGCC
TCGCCGCGTC TGGCCGAGAT GCTGGGCCGC GCCTTCCTGC CCGCGATCAC GCTGGTCCTG
GTGGTGACCG CCCACATGAT GCGGATGACG CGGGCGGCGG TCGTCAACGT GCTGGGCGCG
CCCTATGTCA CCATGGCGCG ATTGAAGGGC GTGTCGCGCT GGCGCGTGGT CACCCGCCAC
GCCTTGCCGA ATGCCCTGGC GCCCATCGTC AACGTGGTGG CGCTGAACGT GGCCTGGCTG
ATCACCGGCG TCGTCATCGT CGAGGTGGTC TTCGTCTATC CCGGCCTTGG CCAGTTGATG
GTGGACAGCG TGACCAATCG CGACATTCCC GTGGTGCAGG CCTGCGCGCT GATCTTTGCC
GCGGTCTATA TCCTGCTGAA CCTGCTGGCC GACGTTCTGG CGATCGCCAC GAACCCGCGC
CTGCTGCATC CGAGGTAA
 
Protein sequence
MSAAEARRRP ILRMIAGRLG IGVFTLFVIS VLIFLAVSLL PGDIAQQVLG QSATPETVAA 
FRRELGLDQP LAWRYLDWVG GVLSGDFGRS LANGRPVADL LAARLGNTLF LAAYAAVIAV
PLAVGLGLLA ALWRGSWFDR IANVATLSAI SFPEFFIAYI LMFWLSVRMG WFPSIADPGA
SPRLAEMLGR AFLPAITLVL VVTAHMMRMT RAAVVNVLGA PYVTMARLKG VSRWRVVTRH
ALPNALAPIV NVVALNVAWL ITGVVIVEVV FVYPGLGQLM VDSVTNRDIP VVQACALIFA
AVYILLNLLA DVLAIATNPR LLHPR